Non-Coding RNA Search

Emb1-C0005186_I15

Sequence:


               
               GGTTTAGTTTAAAAAAAAAAAAAGATTTTTTTTTTTAAGCTCAAAAATAGCTTTAGCACA
TTTCTTAATCTCAGCCAACTGTTAAAGCCAGACAGGACCTTGAAAATCATGTCAGCCCCT
TGCTTTTGTTTACCTTAGAAGTCCTGGAAGGTTTATCTTATTTCCAAAGAAGGTCACAAC
TGATTACCAGACAGCCAAGCCCAGATCTAACTCTTTCCTTCCTGTGAACCTGCTCTCCAT
TGAAACCCACTAGATTGCCAAACCATTTTCCCCAAAATAGTTCAAAGAATTTCCAAAGTC
CAGTGGATTTTATTTTAAAGTCAGGATATGCACATATGCCATAGGATATTTTTTGGAGAG
GTCCTGGGAGGCCCTTTGACCATTGTGATTCCTGTTCCACAACTTAACTAAACCCTGTGA
CCTTGCAAAATGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTTTAGTTTAAAAAAAAAAAAAGATTTTTTTTTTTAAGCTCAAAAATAGCTTTAGCACA
TTTCTTAATCTCAGCCAACTGTTAAAGCCAGACAGGACCTTGAAAATCATGTCAGCCCCT
TGCTTTTGTTTACCTTAGAAGTCCTGGAAGGTTTATCTTATTTCCAAAGAAGGTCACAAC
TGATTACCAGACAGCCAAGCCCAGATCTAACTCTTTCCTTCCTGTGAACCTGCTCTCCAT
TGAAACCCACTAGATTGCCAAACCATTTTCCCCAAAATAGTTCAAAGAATTTCCAAAGTC
CAGTGGATTTTATTTTAAAGTCAGGATATGCACATATGCCATAGGATATTTTTTGGAGAG
GTCCTGGGAGGCCCTTTGACCATTGTGATTCCTGTTCCACAACTTAACTAAACCCTGTGA
CCTTGCAAAATGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               303-404, + strand, RNAz p=0.979181

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               303-404, + strand, RNAz p=0.979181

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               22-434, gnl|bosTau2|chr9 (12889370-12888960)
               

               
               22-434, gnl|Hg17|chr6 (126209185-126209643)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               22-434, gnl|bosTau2|chr9 (12889370-12888960)
               

               
               22-434, gnl|Hg17|chr6 (126209185-126209643)

	22-434, gnl\|bosTau2\|chr9 (12889370-12888960)
	22-434, gnl\|Hg17\|chr6 (126209185-126209643)