Non-Coding RNA Search

Emb1-C0005190_P11

Sequence:


               
               TGCTTGTATCAAACCCCTGGGTTGAACTTTTTCTAGTGGCCTCTAATACCAGCTGGGGGC
TGAGATGGGGAGGCTATAGTTGCTAGTTGCCTGGCAACATGACATCTGCTCTGTCCTTGG
GGTTTGAGAGGAAGATAGAGACCAATGTAAATGCTAATTGCAGTTTTTCTCTCGGTGCTA
GATTTTTTTTTCTCCTTGGCTGCTGGTCCCTGACCCTCCCTGCAGGGAGAAGGGCCTGAG
GAGCCCAGATTTGGGCCCACTGTAATGCTTCCTGGTTCTCTTCTAAAATGAACCCTCAGC
TCAACTTGTTGTTGAGAGCAACCTTCTTCACATTTGCTATGAAGGGAGGAGAGCAAGAAG
AAGGCTGGACTAGTCACTGATGATCTTTTCAGTCTCCTGTTTTCTTTCACTAAAGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCTTGTATCAAACCCCTGGGTTGAACTTTTTCTAGTGGCCTCTAATACCAGCTGGGGGC
TGAGATGGGGAGGCTATAGTTGCTAGTTGCCTGGCAACATGACATCTGCTCTGTCCTTGG
GGTTTGAGAGGAAGATAGAGACCAATGTAAATGCTAATTGCAGTTTTTCTCTCGGTGCTA
GATTTTTTTTTCTCCTTGGCTGCTGGTCCCTGACCCTCCCTGCAGGGAGAAGGGCCTGAG
GAGCCCAGATTTGGGCCCACTGTAATGCTTCCTGGTTCTCTTCTAAAATGAACCCTCAGC
TCAACTTGTTGTTGAGAGCAACCTTCTTCACATTTGCTATGAAGGGAGGAGAGCAAGAAG
AAGGCTGGACTAGTCACTGATGATCTTTTCAGTCTCCTGTTTTCTTTCACTAAAGCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               197-409, - strand, RNAz p=0.932169

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               197-409, - strand, RNAz p=0.932169

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-409, gnl|bosTau2|chrX (20460065-20460485)
               

               
               1-409, gnl|Hg17|chrX (69483048-69483469)
               

               
               1-409, gnl|Mm7|chrX (96125133-96125536)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-409, gnl|bosTau2|chrX (20460065-20460485)
               

               
               1-409, gnl|Hg17|chrX (69483048-69483469)
               

               
               1-409, gnl|Mm7|chrX (96125133-96125536)

	1-409, gnl\|bosTau2\|chrX (20460065-20460485)
	1-409, gnl\|Hg17\|chrX (69483048-69483469)
	1-409, gnl\|Mm7\|chrX (96125133-96125536)