Non-Coding RNA Search

Emb1-C0005191_A02

Sequence:


               
               GACAAACTTTCATGGAGATTACAAGAGGAAATGGTAAAATTTTGAGTTCTTGATTTTTAG
AATTTTCAGTGTATTTTAGATTCTCAGTAAAGAACGATGTCATCTAAAGAGTCATCCTTT
TGTTTTCATATTCAAGTTTCAAATGTGAATTTGTAAGGTAAAGTTATTTTACTCTGACTT
TGTGAGTAATTGGGGATACTGTCCAGGAAACATCAAAGCACAGCTATAACAAGCTGTCCT
GTGGTTGTCCTGTTGTGATAAAGTACATAAGAGAATTGTATTTAAAATGTCCTCAACTCG
TTTTATATTGTTATATTTTTATAAAGAAGTCCTACTTTTTAATAAGTATTTGCATGAAAA
CCATTTCAGGTTACTGTAGAAGATAGCAGATTATAAAGGTTATTTCACGAAGCAGAAGAT
ACTAGTGTTGATTGTGTTTTAAAAATCTGGGTTTTGGGTGCTGCCTGTACTGCATATTTT
CTTTTGTAAAGAGCTTTGACCTCTTGATCTGTGTTCTTATTGTGCCAATAACCGTGTGCG
TTAGATCTGTGATGCATTTTCCCTTCTCCATTTGTATTATGTCCTTTAACAGAAAGCACA
GCTGAGTACCAGCTAACTGGAGTAACTTTGCTGTTTTGCTGCTTGTTGCATGCACACAGG
AATGGAAAGCGAGCTCCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACAAACTTTCATGGAGATTACAAGAGGAAATGGTAAAATTTTGAGTTCTTGATTTTTAG
AATTTTCAGTGTATTTTAGATTCTCAGTAAAGAACGATGTCATCTAAAGAGTCATCCTTT
TGTTTTCATATTCAAGTTTCAAATGTGAATTTGTAAGGTAAAGTTATTTTACTCTGACTT
TGTGAGTAATTGGGGATACTGTCCAGGAAACATCAAAGCACAGCTATAACAAGCTGTCCT
GTGGTTGTCCTGTTGTGATAAAGTACATAAGAGAATTGTATTTAAAATGTCCTCAACTCG
TTTTATATTGTTATATTTTTATAAAGAAGTCCTACTTTTTAATAAGTATTTGCATGAAAA
CCATTTCAGGTTACTGTAGAAGATAGCAGATTATAAAGGTTATTTCACGAAGCAGAAGAT
ACTAGTGTTGATTGTGTTTTAAAAATCTGGGTTTTGGGTGCTGCCTGTACTGCATATTTT
CTTTTGTAAAGAGCTTTGACCTCTTGATCTGTGTTCTTATTGTGCCAATAACCGTGTGCG
TTAGATCTGTGATGCATTTTCCCTTCTCCATTTGTATTATGTCCTTTAACAGAAAGCACA
GCTGAGTACCAGCTAACTGGAGTAACTTTGCTGTTTTGCTGCTTGTTGCATGCACACAGG
AATGGAAAGCGAGCTCCTTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               561-680, - strand, RNAz p=0.52294

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               561-680, - strand, RNAz p=0.52294

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-680, gnl|bosTau2|chr24 (31244008-31244653)
               

               
               4-680, gnl|Hg17|chr18 (12974643-12975326)
               

               
               4-680, gnl|Mm7|chr18 (68184938-68185531)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-680, gnl|bosTau2|chr24 (31244008-31244653)
               

               
               4-680, gnl|Hg17|chr18 (12974643-12975326)
               

               
               4-680, gnl|Mm7|chr18 (68184938-68185531)

	4-680, gnl\|bosTau2\|chr24 (31244008-31244653)
	4-680, gnl\|Hg17\|chr18 (12974643-12975326)
	4-680, gnl\|Mm7\|chr18 (68184938-68185531)