Non-Coding RNA Search

Emb1-C0005191_A22

Sequence:


               
               GATGAAATATTTCAGTCCGAGAGTACTCAGGGGTGAAGCTAGAAACATAAGCTAGGGATG
GAATTTGTAAAACCTTCGAACCACTACTAAGTAGTCTTTATTGAAAACATTGCTGAAACT
CTTAAGAAGAGGGTGGACTTGATCAGATCTGGGATTAAGAAAGATGAGGAGGAGGGTGAG
AGGAGCGGGGAGAGAGAGTCTGGTGGCCCCATAGCAGGTCATCATAATTGTTCAGATGAC
AGATAGAAGGTATCCTTCCAGGCTAGGGCAGTGGCAAGGAAGTGGATGGATGGGGGACCT
GGCAGAGGGAAGGGATTAAGAAAGGATGACTTCCTCCAAGGTTGTGCCAGATCTAGGCTG
CTCTCTCTAAATAGTGCTTCCAGAAACAGCAGGGTCTCAATTATCTCACCGTGGGCTGTG
AAATTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGAAATATTTCAGTCCGAGAGTACTCAGGGGTGAAGCTAGAAACATAAGCTAGGGATG
GAATTTGTAAAACCTTCGAACCACTACTAAGTAGTCTTTATTGAAAACATTGCTGAAACT
CTTAAGAAGAGGGTGGACTTGATCAGATCTGGGATTAAGAAAGATGAGGAGGAGGGTGAG
AGGAGCGGGGAGAGAGAGTCTGGTGGCCCCATAGCAGGTCATCATAATTGTTCAGATGAC
AGATAGAAGGTATCCTTCCAGGCTAGGGCAGTGGCAAGGAAGTGGATGGATGGGGGACCT
GGCAGAGGGAAGGGATTAAGAAAGGATGACTTCCTCCAAGGTTGTGCCAGATCTAGGCTG
CTCTCTCTAAATAGTGCTTCCAGAAACAGCAGGGTCTCAATTATCTCACCGTGGGCTGTG
AAATTCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               293-398, - strand, RNAz p=0.58886

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               293-398, - strand, RNAz p=0.58886

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               254-427, gnl|bosTau2|chr8 (60608610-60608425)
               

               
               254-427, gnl|Mm7|chr4 (68373316-68373133)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               254-427, gnl|bosTau2|chr8 (60608610-60608425)
               

               
               254-427, gnl|Mm7|chr4 (68373316-68373133)

	254-427, gnl\|bosTau2\|chr8 (60608610-60608425)
	254-427, gnl\|Mm7\|chr4 (68373316-68373133)