Non-Coding RNA Search

Emb1-C0005196_D12

Sequence:


               
               GGAGGCAGTGAGAGGCTTTCAGAACCCATAGTTCCACCTTCATGATAAAGATGGAGAAAG
AGCCTTTACTTTCAGGTTTTGATGAAGAGGAAAATAGGCTTACATGGAGCCTCCAAAGAA
CATTGTGGGCTTCCTTTCCTCTTCTCCTCCAGCAAAAGGTGACCATGTTTTAAAACATGG
ACAAGTGGAATTAGACTGGGATGCTTTGGCCTGCCTTTGATAAGGACATGGAATACTCAT
GTTGGCAAAAATAGTTACTCTAGGATCACGGAACAATTTTGAATTTATTTCAATTTGTTT
TAACTTTGAGAATCCCAGGGGTGTCTTATCCTTGGATACAATGGAATCTTATCTTACTTG
ATAATTTATTACCAGATCTAGTATAAACACTGAGGTTATAAATAGAGGAAGTTGGATGTT
TTTGTTTTCCTGTGTCTAATCTCTGCTTTTTATTTAACAGAATGCAGAGAGTTCTGCTAT
ATCACAGAACACTCATGTTCCCCACATCTCTACCTTCTGAGCATACCCTCTCTTTTGGAT
CAGTTATCAGTTGTAGATGCAAAAATCCCAGTGCAATAGGCCAGCTCTTCTTCCACATCT
TACTTATATGCTCTTGTTGAGAATGTGATACTTATGGATGGCAGTTTTGTGGCCTCAGAT
CCCTATATGGGGGGTATTCTTTTAGACAATATAAATATTAATAGCATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGGCAGTGAGAGGCTTTCAGAACCCATAGTTCCACCTTCATGATAAAGATGGAGAAAG
AGCCTTTACTTTCAGGTTTTGATGAAGAGGAAAATAGGCTTACATGGAGCCTCCAAAGAA
CATTGTGGGCTTCCTTTCCTCTTCTCCTCCAGCAAAAGGTGACCATGTTTTAAAACATGG
ACAAGTGGAATTAGACTGGGATGCTTTGGCCTGCCTTTGATAAGGACATGGAATACTCAT
GTTGGCAAAAATAGTTACTCTAGGATCACGGAACAATTTTGAATTTATTTCAATTTGTTT
TAACTTTGAGAATCCCAGGGGTGTCTTATCCTTGGATACAATGGAATCTTATCTTACTTG
ATAATTTATTACCAGATCTAGTATAAACACTGAGGTTATAAATAGAGGAAGTTGGATGTT
TTTGTTTTCCTGTGTCTAATCTCTGCTTTTTATTTAACAGAATGCAGAGAGTTCTGCTAT
ATCACAGAACACTCATGTTCCCCACATCTCTACCTTCTGAGCATACCCTCTCTTTTGGAT
CAGTTATCAGTTGTAGATGCAAAAATCCCAGTGCAATAGGCCAGCTCTTCTTCCACATCT
TACTTATATGCTCTTGTTGAGAATGTGATACTTATGGATGGCAGTTTTGTGGCCTCAGAT
CCCTATATGGGGGGTATTCTTTTAGACAATATAAATATTAATAGCATG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               7-125, - strand, RNAz p=0.934504

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               7-125, - strand, RNAz p=0.934504

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               3-701, gnl|bosTau2|chr1 (63497310-63498011)
               

               
               3-701, gnl|Hg17|chr3 (170706386-170705277)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-701, gnl|bosTau2|chr1 (63497310-63498011)
               

               
               3-701, gnl|Hg17|chr3 (170706386-170705277)

	3-701, gnl\|bosTau2\|chr1 (63497310-63498011)
	3-701, gnl\|Hg17\|chr3 (170706386-170705277)