Non-Coding RNA Search

Emb1-C0005196_G01

Sequence:


               
               GGACGAGACAATCAGGAAAACCACCAAGCCCTGTCCTCGGTGCCATGTGCCGGTTGAAAA
AAACGTTCTCTGAACACAGTGACTTCATCAACCCAGGAAGAAAGAGCCCCTTGAAGACAC
TGACCTGTGCAAGGTCGCCCAGGGAGGCAGTGGCCTCCCCGGAGGCTGGGCTCAGGGGTC
AGAACCCCCTCTCTGAACAGCACTCGCTTCACAGACAGAGAGGCAGAAATTTGCTTCCAC
TGCGTCCTTTGCCTCAACATGAAGGCATCATCAGACCGGGTGGAGAACAGTTTAAGCCAC
AGGATTATTTACTCACTCAATTAGTCAAGCTTGGTCAATGGTGCTCTTTCAGCCATCCTG
GAGCCGGTGGGAACAGGGCTTCTAAAATGACAACTATGTCGGGAAGGCTGTGGTCCAGAG
CCGTTTTTGCCGGCTGTAGGCAGGGTCTCTGGAGCCAAAGGGAGCACACAGCTCTTTTTG
AAACTGAAGATGTTTATGCTCGAGGTGGAACCGAATTCTGTCTAGGCAAGCGGTGTGCTT
ATGTGGACAAAGCAGAGAATGACACAGTAACTCCTGGTGGAAACACCTACAAAAACCAGA
GTGAGCTAGAGTAAGGAACTGGCTCGTGGCAACAGTGGCGTGGTTCGTGCCAGATCCCAA
AGCTACCTTCCTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACGAGACAATCAGGAAAACCACCAAGCCCTGTCCTCGGTGCCATGTGCCGGTTGAAAA
AAACGTTCTCTGAACACAGTGACTTCATCAACCCAGGAAGAAAGAGCCCCTTGAAGACAC
TGACCTGTGCAAGGTCGCCCAGGGAGGCAGTGGCCTCCCCGGAGGCTGGGCTCAGGGGTC
AGAACCCCCTCTCTGAACAGCACTCGCTTCACAGACAGAGAGGCAGAAATTTGCTTCCAC
TGCGTCCTTTGCCTCAACATGAAGGCATCATCAGACCGGGTGGAGAACAGTTTAAGCCAC
AGGATTATTTACTCACTCAATTAGTCAAGCTTGGTCAATGGTGCTCTTTCAGCCATCCTG
GAGCCGGTGGGAACAGGGCTTCTAAAATGACAACTATGTCGGGAAGGCTGTGGTCCAGAG
CCGTTTTTGCCGGCTGTAGGCAGGGTCTCTGGAGCCAAAGGGAGCACACAGCTCTTTTTG
AAACTGAAGATGTTTATGCTCGAGGTGGAACCGAATTCTGTCTAGGCAAGCGGTGTGCTT
ATGTGGACAAAGCAGAGAATGACACAGTAACTCCTGGTGGAAACACCTACAAAAACCAGA
GTGAGCTAGAGTAAGGAACTGGCTCGTGGCAACAGTGGCGTGGTTCGTGCCAGATCCCAA
AGCTACCTTCCTGCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61887229|ref|XP_585008.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61887229|ref|XP_585008.1|

Aligned organism(s): 8 entry(ies)

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Aligned organism(s): 8 entry(ies)

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               68-347, gnl|bosTau2|chr9 (59824653-59824383)
               

               
               68-347, gnl|Hg17|chr6 (161712388-161711782)
               


               
               369-675, gnl|bosTau2|chr13 (43930961-43931269)
               

               
               369-675, gnl|Hg17|chr8 (122461915-122461609)
               

               
               369-675, gnl|Mm7|chr17 (27331186-27330880)
               


               
               440-673, gnl|bosTau2|chr10 (56980625-56980859)
               

               
               440-673, gnl|Hg17|chr9 (71434115-71434349)
               

               
               440-673, gnl|Mm7|chr17 (27331115-27330883)

Aligned organism(s): 8 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               68-347, gnl|bosTau2|chr9 (59824653-59824383)
               

               
               68-347, gnl|Hg17|chr6 (161712388-161711782)
               


               
               369-675, gnl|bosTau2|chr13 (43930961-43931269)
               

               
               369-675, gnl|Hg17|chr8 (122461915-122461609)
               

               
               369-675, gnl|Mm7|chr17 (27331186-27330880)
               


               
               440-673, gnl|bosTau2|chr10 (56980625-56980859)
               

               
               440-673, gnl|Hg17|chr9 (71434115-71434349)
               

               
               440-673, gnl|Mm7|chr17 (27331115-27330883)

	68-347, gnl\|bosTau2\|chr9 (59824653-59824383)
	68-347, gnl\|Hg17\|chr6 (161712388-161711782)

	369-675, gnl\|bosTau2\|chr13 (43930961-43931269)
	369-675, gnl\|Hg17\|chr8 (122461915-122461609)
	369-675, gnl\|Mm7\|chr17 (27331186-27330880)

	440-673, gnl\|bosTau2\|chr10 (56980625-56980859)
	440-673, gnl\|Hg17\|chr9 (71434115-71434349)
	440-673, gnl\|Mm7\|chr17 (27331115-27330883)