Non-Coding RNA Search

Emb1-C0005211_J23

Sequence:


               
               GGGTGGGGTTTGATTTGCCTTAAAGGATGGATGAGTGTTGGGTGGTAGCCAAGAGAGGGC
GCGTGGGCATCTTGAGCAACGGGGACTGTAAGATGCGGGCTGGGAGAGCACAGCGTGGGC
TGGGAATGTGAGCAGGTTTGCAGAGCCTCTTGGTGGCGTTAGTGAAAATGACCAACACGC
TTTGAGGATTGTAGATACTTGTACTACCTCATTTAATCACAGCAACCAGAAGGGGGGCTG
CAGACGGGGAAACTGAGGCACAGAGGCAACTGCGACTTGTTCAAGGAAAGGAGCTGCTGA
TAGGGGAGTTAGGCGTCAAGTCCAGCATCTGGACCCCCGAGCCCAAGCTCCTAGCTACTG
TGGATGTTCCCCTGCAAGGGGCCTCAGACAGTGAATGGTGCAGCTTCCTCCCTGTGTCAA
AATCTCAGACCATCTCATTCCTAGGAGAATAAAAAATCTAGACCCTAGCAGGTGTACAAT
TAAGGGTTTTGTAGGCAAGAAGAATTCAACAGTGAGATAGGGACCATATGGTCTTGGAGT
GTGCAGTTAGGCTTTAGCCTGCATTCAGTGGAATTGAAAGGTTTTATGCAGGGAAGTGAT
GTAATGAAAGAGGAGGATGTGGAAGATAATCTTGTGGTGAATGTGCACTGACACTGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGTGGGGTTTGATTTGCCTTAAAGGATGGATGAGTGTTGGGTGGTAGCCAAGAGAGGGC
GCGTGGGCATCTTGAGCAACGGGGACTGTAAGATGCGGGCTGGGAGAGCACAGCGTGGGC
TGGGAATGTGAGCAGGTTTGCAGAGCCTCTTGGTGGCGTTAGTGAAAATGACCAACACGC
TTTGAGGATTGTAGATACTTGTACTACCTCATTTAATCACAGCAACCAGAAGGGGGGCTG
CAGACGGGGAAACTGAGGCACAGAGGCAACTGCGACTTGTTCAAGGAAAGGAGCTGCTGA
TAGGGGAGTTAGGCGTCAAGTCCAGCATCTGGACCCCCGAGCCCAAGCTCCTAGCTACTG
TGGATGTTCCCCTGCAAGGGGCCTCAGACAGTGAATGGTGCAGCTTCCTCCCTGTGTCAA
AATCTCAGACCATCTCATTCCTAGGAGAATAAAAAATCTAGACCCTAGCAGGTGTACAAT
TAAGGGTTTTGTAGGCAAGAAGAATTCAACAGTGAGATAGGGACCATATGGTCTTGGAGT
GTGCAGTTAGGCTTTAGCCTGCATTCAGTGGAATTGAAAGGTTTTATGCAGGGAAGTGAT
GTAATGAAAGAGGAGGATGTGGAAGATAATCTTGTGGTGAATGTGCACTGACACTGGGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               404-518, - strand, RNAz p=0.760277

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               404-518, - strand, RNAz p=0.760277

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-659, gnl|bosTau2|chr1 (35191280-35190607)
               

               
               1-659, gnl|Hg17|chr3 (124323131-124323801)
               

               
               1-659, gnl|Mm7|chr16 (35107055-35106299)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-659, gnl|bosTau2|chr1 (35191280-35190607)
               

               
               1-659, gnl|Hg17|chr3 (124323131-124323801)
               

               
               1-659, gnl|Mm7|chr16 (35107055-35106299)

	1-659, gnl\|bosTau2\|chr1 (35191280-35190607)
	1-659, gnl\|Hg17\|chr3 (124323131-124323801)
	1-659, gnl\|Mm7\|chr16 (35107055-35106299)