Emb1-C0005215_C04
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGTGAGTTTAAGGGCAGAGTTCAGCATTTAGCTGAAGAAAAAAAGTATCAAAATCTCTTC AGTGAAAATAAGATCGCAGATGAACAACATCAAGATCGGTCAAACATATGTGATCACAAC TTTCCAAAAAATTCCTTTCAGTTAGATCCTAAGTGTGCAGCTGTATTGGATGTGGTCTGT AGGCCTGAACAGATGGACACAGGGCCAGGAGCTATCAAAACAAAATGTGTACCAACAGAA CATCGTGAAATACAAAACCAGTGCCTGGAGTTCTTTTCCTCTAATTCAGTAGACAAGCCA AAGCCTGAAGAAGCAGTTGGGAAGGTCTCAGGCCTTAAAATATCAACCAATACTGAATTT CTCAGTATAATGACCTCCAGCCAGCTTGCTTTTTTAGCTCAAAGGAAGTATAAAGGGCAG AATTCTATAAATAAGACCGTAAACATGGAGACCGAACCAGAGGCAAGTCATGGGGAAATA AGAATAACCAAAGACAATTTGAATCAGCCTAATGATGATACTGCAGAAGGAGTATATGAA GATGGACAAAATCAAGCTCATTCCCTTGAACTTGTTAGTCCTGTTTGTCCTGAAACAAGA AGTCACCACATTCACTTAAACTCTGATAAAGGTCTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGTGAGTTTAAGGGCAGAGTTCAGCATTTAGCTGAAGAAAAAAAGTATCAAAATCTCTTC AGTGAAAATAAGATCGCAGATGAACAACATCAAGATCGGTCAAACATATGTGATCACAAC TTTCCAAAAAATTCCTTTCAGTTAGATCCTAAGTGTGCAGCTGTATTGGATGTGGTCTGT AGGCCTGAACAGATGGACACAGGGCCAGGAGCTATCAAAACAAAATGTGTACCAACAGAA CATCGTGAAATACAAAACCAGTGCCTGGAGTTCTTTTCCTCTAATTCAGTAGACAAGCCA AAGCCTGAAGAAGCAGTTGGGAAGGTCTCAGGCCTTAAAATATCAACCAATACTGAATTT CTCAGTATAATGACCTCCAGCCAGCTTGCTTTTTTAGCTCAAAGGAAGTATAAAGGGCAG AATTCTATAAATAAGACCGTAAACATGGAGACCGAACCAGAGGCAAGTCATGGGGAAATA AGAATAACCAAAGACAATTTGAATCAGCCTAATGATGATACTGCAGAAGGAGTATATGAA GATGGACAAAATCAAGCTCATTCCCTTGAACTTGTTAGTCCTGTTTGTCCTGAAACAAGA AGTCACCACATTCACTTAAACTCTGATAAAGGTCTTG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 238-346, - strand, RNAz p=0.970108 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 238-346, - strand, RNAz p=0.970108 |
| Aligned organism(s): 70 entry(ies) | More info |
| Aligned organism(s): 70 entry(ies) | Help | Less info |
| 2-346, gnl|bosTau2|chr28 (31981931-31982272) | |
| 2-346, gnl|canFam2|chr4 (37901234-37901803) | |
| 2-346, gnl|dasNov1|scaffold_62336 (5313-4744) | |
| 2-346, gnl|echTel1|scaffold_250511 (1356-824) | |
| 2-346, gnl|galGal2|chr6 (2161286-2161850) | |
| 2-346, gnl|Hg17|chr10 (88901459-88901859) | |
| 2-346, gnl|hg17|chr14 (87488669-87489241) | |
| 2-346, gnl|mm7|chr14 (31701484-31700942) | |
| 2-346, gnl|monDom2|scaffold_14 (21802414-21801872) | |
| 2-346, gnl|panTro1|chr15_random (19216467-19215896) | |
| 2-346, gnl|rheMac2|chr9 (49394696-49395274) | |
| 2-346, gnl|rn3|chr16 (9905205-9904648) | |
| 399-637, gnl|bosTau2|chr28 (31982269-31982507) | |
| 399-637, gnl|canFam2|chr4 (37901907-37902588) | |
| 399-637, gnl|canFam2|chr4 (37901907-37902668) | |
| 399-637, gnl|canFam2|chr4 (37901907-37902671) | |
| 399-637, gnl|canFam2|chr4 (37901907-37902671) | |
| 399-637, gnl|canFam2|chr4 (37901907-37902638) | |
| 399-637, gnl|dasNov1|scaffold_106441 (1423-2178) | |
| 399-637, gnl|dasNov1|scaffold_106441 (1423-2181) | |
| 399-637, gnl|dasNov1|scaffold_106441 (1423-2181) | |
| 399-637, gnl|dasNov1|scaffold_106441 (1423-2148) | |
| 399-637, gnl|dasNov1|scaffold_62336 (4637-3964) | |
| 399-637, gnl|echTel1|scaffold_250511 (715-54) | |
| 399-637, gnl|echTel1|scaffold_250511 (715-4) | |
| 399-637, gnl|echTel1|scaffold_250511 (715-4) | |
| 399-637, gnl|echTel1|scaffold_250511 (715-4) | |
| 399-637, gnl|echTel1|scaffold_250511 (715-4) | |
| 399-637, gnl|galGal2|chr6 (2161962-2162655) | |
| 399-637, gnl|galGal2|chr6 (2161962-2162735) | |
| 399-637, gnl|galGal2|chr6 (2161962-2162738) | |
| 399-637, gnl|galGal2|chr6 (2161962-2162738) | |
| 399-637, gnl|galGal2|chr6 (2161962-2162705) | |
| 399-637, gnl|hg17|chr10 (46800499-46801258) | |
| 399-637, gnl|hg17|chr10 (48708170-48708932) | |
| 399-637, gnl|hg17|chr10 (46318420-46319182) | |
| 399-637, gnl|hg17|chr10 (88901858-88902589) | |
| 399-637, gnl|Hg17|chr10 (88901857-88902091) | |
| 399-637, gnl|hg17|chr14 (87489355-87490035) | |
| 399-637, gnl|mm7|chr14 (31700835-31700199) | |
| 399-637, gnl|mm7|chr14 (31700835-31700119) | |
| 399-637, gnl|mm7|chr14 (31700835-31700116) | |
| 399-637, gnl|mm7|chr14 (31700835-31700116) | |
| 399-637, gnl|mm7|chr14 (31700835-31700149) | |
| 399-637, gnl|Mm7|chr14 (31700835-31700600) | |
| 399-637, gnl|monDom2|scaffold_14 (21801768-21801114) | |
| 399-637, gnl|monDom2|scaffold_14 (21801768-21801034) | |
| 399-637, gnl|monDom2|scaffold_14 (21801768-21801031) | |
| 399-637, gnl|monDom2|scaffold_14 (21801768-21801031) | |
| 399-637, gnl|monDom2|scaffold_14 (21801768-21801064) | |
| 399-637, gnl|panTro1|chr15_random (19215789-19215109) | |
| 399-637, gnl|panTro1|chr8 (47313897-47314661) | |
| 399-637, gnl|panTro1|chr8 (47313897-47314664) | |
| 399-637, gnl|panTro1|chr8 (47313897-47314664) | |
| 399-637, gnl|panTro1|chr8 (90579280-90580011) | |
| 399-637, gnl|rheMac2|chr9 (49395381-49396062) | |
| 399-637, gnl|rheMac2|chr9 (49395381-49396142) | |
| 399-637, gnl|rheMac2|chr9 (49395381-49396145) | |
| 399-637, gnl|rheMac2|chr9 (49395381-49396145) | |
| 399-637, gnl|rheMac2|chr9 (49395381-49396112) | |
| 399-637, gnl|rn3|chr16 (9904541-9903860) | |
| 399-637, gnl|rn3|chr16 (9904541-9903780) | |
| 399-637, gnl|rn3|chr16 (9904541-9903777) | |
| 399-637, gnl|rn3|chr16 (9904541-9903777) | |
| 399-637, gnl|rn3|chr16 (9904541-9903810) | |
| 399-637, gnl|xenTro1|scaffold_44 (374664-375258) | |
| 399-637, gnl|xenTro1|scaffold_44 (374676-375338) | |
| 399-637, gnl|xenTro1|scaffold_44 (374676-375338) | |
| 399-637, gnl|xenTro1|scaffold_44 (374676-375338) | |
| 399-637, gnl|xenTro1|scaffold_44 (374676-375308) |
| Aligned organism(s): 70 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-346, gnl|bosTau2|chr28 (31981931-31982272) | |
| 2-346, gnl|canFam2|chr4 (37901234-37901803) | |
| 2-346, gnl|dasNov1|scaffold_62336 (5313-4744) | |
| 2-346, gnl|echTel1|scaffold_250511 (1356-824) | |
| 2-346, gnl|galGal2|chr6 (2161286-2161850) | |
| 2-346, gnl|Hg17|chr10 (88901459-88901859) | |
| 2-346, gnl|hg17|chr14 (87488669-87489241) | |
| 2-346, gnl|mm7|chr14 (31701484-31700942) | |
| 2-346, gnl|monDom2|scaffold_14 (21802414-21801872) | |
| 2-346, gnl|panTro1|chr15_random (19216467-19215896) | |
| 2-346, gnl|rheMac2|chr9 (49394696-49395274) | |
| 2-346, gnl|rn3|chr16 (9905205-9904648) | |
| 399-637, gnl|bosTau2|chr28 (31982269-31982507) | |
| 399-637, gnl|canFam2|chr4 (37901907-37902588) | |
| 399-637, gnl|canFam2|chr4 (37901907-37902668) | |
| 399-637, gnl|canFam2|chr4 (37901907-37902671) | |
| 399-637, gnl|canFam2|chr4 (37901907-37902671) | |
| 399-637, gnl|canFam2|chr4 (37901907-37902638) | |
| 399-637, gnl|dasNov1|scaffold_106441 (1423-2178) | |
| 399-637, gnl|dasNov1|scaffold_106441 (1423-2181) | |
| 399-637, gnl|dasNov1|scaffold_106441 (1423-2181) | |
| 399-637, gnl|dasNov1|scaffold_106441 (1423-2148) | |
| 399-637, gnl|dasNov1|scaffold_62336 (4637-3964) | |
| 399-637, gnl|echTel1|scaffold_250511 (715-54) | |
| 399-637, gnl|echTel1|scaffold_250511 (715-4) | |
| 399-637, gnl|echTel1|scaffold_250511 (715-4) | |
| 399-637, gnl|echTel1|scaffold_250511 (715-4) | |
| 399-637, gnl|echTel1|scaffold_250511 (715-4) | |
| 399-637, gnl|galGal2|chr6 (2161962-2162655) | |
| 399-637, gnl|galGal2|chr6 (2161962-2162735) | |
| 399-637, gnl|galGal2|chr6 (2161962-2162738) | |
| 399-637, gnl|galGal2|chr6 (2161962-2162738) | |
| 399-637, gnl|galGal2|chr6 (2161962-2162705) | |
| 399-637, gnl|hg17|chr10 (46800499-46801258) | |
| 399-637, gnl|hg17|chr10 (48708170-48708932) | |
| 399-637, gnl|hg17|chr10 (46318420-46319182) | |
| 399-637, gnl|hg17|chr10 (88901858-88902589) | |
| 399-637, gnl|Hg17|chr10 (88901857-88902091) | |
| 399-637, gnl|hg17|chr14 (87489355-87490035) | |
| 399-637, gnl|mm7|chr14 (31700835-31700199) | |
| 399-637, gnl|mm7|chr14 (31700835-31700119) | |
| 399-637, gnl|mm7|chr14 (31700835-31700116) | |
| 399-637, gnl|mm7|chr14 (31700835-31700116) | |
| 399-637, gnl|mm7|chr14 (31700835-31700149) | |
| 399-637, gnl|Mm7|chr14 (31700835-31700600) | |
| 399-637, gnl|monDom2|scaffold_14 (21801768-21801114) | |
| 399-637, gnl|monDom2|scaffold_14 (21801768-21801034) | |
| 399-637, gnl|monDom2|scaffold_14 (21801768-21801031) | |
| 399-637, gnl|monDom2|scaffold_14 (21801768-21801031) | |
| 399-637, gnl|monDom2|scaffold_14 (21801768-21801064) | |
| 399-637, gnl|panTro1|chr15_random (19215789-19215109) | |
| 399-637, gnl|panTro1|chr8 (47313897-47314661) | |
| 399-637, gnl|panTro1|chr8 (47313897-47314664) | |
| 399-637, gnl|panTro1|chr8 (47313897-47314664) | |
| 399-637, gnl|panTro1|chr8 (90579280-90580011) | |
| 399-637, gnl|rheMac2|chr9 (49395381-49396062) | |
| 399-637, gnl|rheMac2|chr9 (49395381-49396142) | |
| 399-637, gnl|rheMac2|chr9 (49395381-49396145) | |
| 399-637, gnl|rheMac2|chr9 (49395381-49396145) | |
| 399-637, gnl|rheMac2|chr9 (49395381-49396112) | |
| 399-637, gnl|rn3|chr16 (9904541-9903860) | |
| 399-637, gnl|rn3|chr16 (9904541-9903780) | |
| 399-637, gnl|rn3|chr16 (9904541-9903777) | |
| 399-637, gnl|rn3|chr16 (9904541-9903777) | |
| 399-637, gnl|rn3|chr16 (9904541-9903810) | |
| 399-637, gnl|xenTro1|scaffold_44 (374664-375258) | |
| 399-637, gnl|xenTro1|scaffold_44 (374676-375338) | |
| 399-637, gnl|xenTro1|scaffold_44 (374676-375338) | |
| 399-637, gnl|xenTro1|scaffold_44 (374676-375338) | |
| 399-637, gnl|xenTro1|scaffold_44 (374676-375308) |