Non-Coding RNA Search

Emb1-C0005216_B24

Sequence:


               
               GGGGAGAGCAGCAGGGTTTAGAATTCCAGGAAGGAAGAGAGAGTGATGTCATCAGATTCC
ATGGACCAGCCCAGGAACCCCTGTGAGGTTGGTGGGGAGTTGGGTGTGCGTGGGGGGTGG
TGGATGGGAGTTTGTGCAGGGGAATTGTGGCTTCAGTAAGGTGTGGGGAGTCCAGTTTCA
AGCAGAGAGGTTGGTTGTGTGGAATCGTGCTGATCTACATTAATGTCTGCTTTTTAAAAA
TCTAAATCATTCTGAATTTGCAGAGTATTTTCTTTGTTGAAAAGGGACATATTCATTTAA
CAAAGGAGCTAATCTCGATGGAGCGATATAATACCTTTTTATGATTATCCTCCCTGTAGT
ATTTGTATGTCTTTATCCCGGGTACGTGAGGGTGTTTGTGCACATATTTTGGATAGATAG
TTGCCTTTGTAGGATGCCTTTTATGGTGCTGCATGAAGGTAAATGCTTCATTAATGCCTG
ATTATTGTATTTATTTTTCTACAGATGGGTGTGTATAAATAAAACACACTTTTTATTTTT
AAAAAAATCTGAAAGAAAATCAAAGCAATTGCTTTTGTAGCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGAGAGCAGCAGGGTTTAGAATTCCAGGAAGGAAGAGAGAGTGATGTCATCAGATTCC
ATGGACCAGCCCAGGAACCCCTGTGAGGTTGGTGGGGAGTTGGGTGTGCGTGGGGGGTGG
TGGATGGGAGTTTGTGCAGGGGAATTGTGGCTTCAGTAAGGTGTGGGGAGTCCAGTTTCA
AGCAGAGAGGTTGGTTGTGTGGAATCGTGCTGATCTACATTAATGTCTGCTTTTTAAAAA
TCTAAATCATTCTGAATTTGCAGAGTATTTTCTTTGTTGAAAAGGGACATATTCATTTAA
CAAAGGAGCTAATCTCGATGGAGCGATATAATACCTTTTTATGATTATCCTCCCTGTAGT
ATTTGTATGTCTTTATCCCGGGTACGTGAGGGTGTTTGTGCACATATTTTGGATAGATAG
TTGCCTTTGTAGGATGCCTTTTATGGTGCTGCATGAAGGTAAATGCTTCATTAATGCCTG
ATTATTGTATTTATTTTTCTACAGATGGGTGTGTATAAATAAAACACACTTTTTATTTTT
AAAAAAATCTGAAAGAAAATCAAAGCAATTGCTTTTGTAGCAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-119, + strand, RNAz p=0.667688

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-119, + strand, RNAz p=0.667688

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-582, gnl|bosTau2|chr5 (44374531-44373948)
               

               
               1-582, gnl|Hg17|chr22 (34682197-34681624)
               

               
               1-582, gnl|Mm7|chr15 (77328528-77327964)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-582, gnl|bosTau2|chr5 (44374531-44373948)
               

               
               1-582, gnl|Hg17|chr22 (34682197-34681624)
               

               
               1-582, gnl|Mm7|chr15 (77328528-77327964)

	1-582, gnl\|bosTau2\|chr5 (44374531-44373948)
	1-582, gnl\|Hg17\|chr22 (34682197-34681624)
	1-582, gnl\|Mm7\|chr15 (77328528-77327964)