Non-Coding RNA Search

Emb1-C0005217_A24

Sequence:


               
               GTCACAGTATTGGAGGAAAAGCTAGTTTCATCCTCTAATGCAATGGAAAGTGCAAGCCAT
CAGGCCACTCTACAGGTAGAGTCCTTGCAGGAACAGTTGAACGTGGTATCCAAGCAAAGG
GATGAAACTGCGCTGCAGCTTTCTGTGTCTCAGGAACAAGTAAAGCAGTATGCTCTGTCA
CTTTCCAACCTGCAGATGGTCCTGGAGCATTTCCAGCAAGAGGAAGAAGCTATGTATTCT
ACTGAACTAGAAAAGCACAGACAGCTTACTGCTGAGTGGAAGAAAAAGGCAGAAAATCTG
GAAGGACAACTAGTGTCATTACAGGAGCGTTTAGATGAAGCAAATGCTGCACTGGATTCA
GCATCAAGACTTACAGAACAGTTAGATTTAAAGGAAGAACAAATTGAAGAACTTAAAAAA
CAAAATGAGCTCCGACAAGAAATGCTGGATGATGTGCAAAAGAAATTGATGAATTTAGTA
AACAGCACAGAAGGAAAAGTGGACAAAGTCCTAATGAGAAACCTCTTCATTGGACACTTC
CACACACCAAAAAACCAGCGTCATGAAGCATTACGATTAATGGGAAGCATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCACAGTATTGGAGGAAAAGCTAGTTTCATCCTCTAATGCAATGGAAAGTGCAAGCCAT
CAGGCCACTCTACAGGTAGAGTCCTTGCAGGAACAGTTGAACGTGGTATCCAAGCAAAGG
GATGAAACTGCGCTGCAGCTTTCTGTGTCTCAGGAACAAGTAAAGCAGTATGCTCTGTCA
CTTTCCAACCTGCAGATGGTCCTGGAGCATTTCCAGCAAGAGGAAGAAGCTATGTATTCT
ACTGAACTAGAAAAGCACAGACAGCTTACTGCTGAGTGGAAGAAAAAGGCAGAAAATCTG
GAAGGACAACTAGTGTCATTACAGGAGCGTTTAGATGAAGCAAATGCTGCACTGGATTCA
GCATCAAGACTTACAGAACAGTTAGATTTAAAGGAAGAACAAATTGAAGAACTTAAAAAA
CAAAATGAGCTCCGACAAGAAATGCTGGATGATGTGCAAAAGAAATTGATGAATTTAGTA
AACAGCACAGAAGGAAAAGTGGACAAAGTCCTAATGAGAAACCTCTTCATTGGACACTTC
CACACACCAAAAAACCAGCGTCATGAAGCATTACGATTAATGGGAAGCATCC

Aligned organism(s): 17 entry(ies)

More info

Aligned organism(s): 17 entry(ies)

Help | Less info


               
               54-220, gnl|bosTau2|chr21 (36446838-36446672)
               

               
               54-220, gnl|canFam2|chr8 (4270546-4270382)
               

               
               54-220, gnl|danRer3|chr13 (34537849-34538012)
               

               
               54-220, gnl|dasNov1|scaffold_18812 (6625-6789)
               

               
               54-220, gnl|fr1|chrUn (302609649-302609409)
               

               
               54-220, gnl|galGal2|chr5 (41351160-41350996)
               

               
               54-220, gnl|hg17|chr12 (105067636-105067797)
               

               
               54-220, gnl|Hg17|chr14 (91531615-91531449)
               

               
               54-220, gnl|loxAfr1|scaffold_23372 (26616-26546)
               

               
               54-220, gnl|mm7|chr12 (99368839-99368678)
               

               
               54-220, gnl|Mm7|chr12 (99368841-99368675)
               

               
               54-220, gnl|monDom2|scaffold_8 (29842226-29842062)
               

               
               54-220, gnl|oryCun1|scaffold_213276 (66963-67084)
               

               
               54-220, gnl|panTro1|chr10 (107580911-107581072)
               

               
               54-220, gnl|rheMac2|chr11 (107264008-107264172)
               

               
               54-220, gnl|rn3|chr6 (126156873-126156712)
               

               
               54-220, gnl|tetNig1|chr10 (11523736-11523899)

Aligned organism(s): 17 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               54-220, gnl|bosTau2|chr21 (36446838-36446672)
               

               
               54-220, gnl|canFam2|chr8 (4270546-4270382)
               

               
               54-220, gnl|danRer3|chr13 (34537849-34538012)
               

               
               54-220, gnl|dasNov1|scaffold_18812 (6625-6789)
               

               
               54-220, gnl|fr1|chrUn (302609649-302609409)
               

               
               54-220, gnl|galGal2|chr5 (41351160-41350996)
               

               
               54-220, gnl|hg17|chr12 (105067636-105067797)
               

               
               54-220, gnl|Hg17|chr14 (91531615-91531449)
               

               
               54-220, gnl|loxAfr1|scaffold_23372 (26616-26546)
               

               
               54-220, gnl|mm7|chr12 (99368839-99368678)
               

               
               54-220, gnl|Mm7|chr12 (99368841-99368675)
               

               
               54-220, gnl|monDom2|scaffold_8 (29842226-29842062)
               

               
               54-220, gnl|oryCun1|scaffold_213276 (66963-67084)
               

               
               54-220, gnl|panTro1|chr10 (107580911-107581072)
               

               
               54-220, gnl|rheMac2|chr11 (107264008-107264172)
               

               
               54-220, gnl|rn3|chr6 (126156873-126156712)
               

               
               54-220, gnl|tetNig1|chr10 (11523736-11523899)

	54-220, gnl\|bosTau2\|chr21 (36446838-36446672)
	54-220, gnl\|canFam2\|chr8 (4270546-4270382)
	54-220, gnl\|danRer3\|chr13 (34537849-34538012)
	54-220, gnl\|dasNov1\|scaffold_18812 (6625-6789)
	54-220, gnl\|fr1\|chrUn (302609649-302609409)
	54-220, gnl\|galGal2\|chr5 (41351160-41350996)
	54-220, gnl\|hg17\|chr12 (105067636-105067797)
	54-220, gnl\|Hg17\|chr14 (91531615-91531449)
	54-220, gnl\|loxAfr1\|scaffold_23372 (26616-26546)
	54-220, gnl\|mm7\|chr12 (99368839-99368678)
	54-220, gnl\|Mm7\|chr12 (99368841-99368675)
	54-220, gnl\|monDom2\|scaffold_8 (29842226-29842062)
	54-220, gnl\|oryCun1\|scaffold_213276 (66963-67084)
	54-220, gnl\|panTro1\|chr10 (107580911-107581072)
	54-220, gnl\|rheMac2\|chr11 (107264008-107264172)
	54-220, gnl\|rn3\|chr6 (126156873-126156712)
	54-220, gnl\|tetNig1\|chr10 (11523736-11523899)