Emb1-C0005218_C24
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGAAATTGGCAGATGTTTTCCAGTTCATAGAGAAAGACCTGATATTACTGGGAGCTACA GCAGTAGAAGACAAACTACAAGATAAAGTTCGAGAAACTATTGAAGCATTGAGAATGGCT GGTATCAAAGTGTGGGTACTTACTGGAGATAAACATGAAACAGCTGTTAGTGTGAGTCTA TCATGTGGACATTTTCACAGAACAATGAACATTCTTGAACTTATAAACCAGAAATCAGAC AGTGAATGTGCTGAAAAATTGAGGCAGCTTGCCAGAAGGATTACAGAGGATCATGTGATT CAGCATGGCCTGGTGGTAGATGGGACCAGTCTGTCTCTTGCGCTCAGAGAGCATGAAAAA CTATTTATGGAAGTTTGTAGGAATTGTTCAGCTGTATTATGCTGTCGTATGGCACCACTG CAGAAAGCAAAGGTAATAAGACTGATAAAAATCTCACCTGAGAAACCTATAACATTAGCT GTTGGTGATGGTGCTAATGATGTCAGCATGATACAAGAAGCACATGTTGGCATAGGGATC ATGGGGAAAGAAGGAAGACAAGCTGCAAGGAACAGTGACTATGCAATGGATTCATCTACT TGTTAAGGGGGCAGTTGTACTTGGTGGGAGCCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGAAATTGGCAGATGTTTTCCAGTTCATAGAGAAAGACCTGATATTACTGGGAGCTACA GCAGTAGAAGACAAACTACAAGATAAAGTTCGAGAAACTATTGAAGCATTGAGAATGGCT GGTATCAAAGTGTGGGTACTTACTGGAGATAAACATGAAACAGCTGTTAGTGTGAGTCTA TCATGTGGACATTTTCACAGAACAATGAACATTCTTGAACTTATAAACCAGAAATCAGAC AGTGAATGTGCTGAAAAATTGAGGCAGCTTGCCAGAAGGATTACAGAGGATCATGTGATT CAGCATGGCCTGGTGGTAGATGGGACCAGTCTGTCTCTTGCGCTCAGAGAGCATGAAAAA CTATTTATGGAAGTTTGTAGGAATTGTTCAGCTGTATTATGCTGTCGTATGGCACCACTG CAGAAAGCAAAGGTAATAAGACTGATAAAAATCTCACCTGAGAAACCTATAACATTAGCT GTTGGTGATGGTGCTAATGATGTCAGCATGATACAAGAAGCACATGTTGGCATAGGGATC ATGGGGAAAGAAGGAAGACAAGCTGCAAGGAACAGTGACTATGCAATGGATTCATCTACT TGTTAAGGGGGCAGTTGTACTTGGTGGGAGCCAT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 72-190, + strand, RNAz p=0.707797 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 72-190, + strand, RNAz p=0.707797 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 72-279, gnl|bosTau2|chr1 (54991748-54991541) | |
| 72-279, gnl|canFam2|chr34 (18880963-18881127) | |
| 72-279, gnl|danRer3|chr22 (48324241-48324077) | |
| 72-279, gnl|dasNov1|scaffold_99442 (2975-3139) | |
| 72-279, gnl|echTel1|scaffold_313867 (1335-1170) | |
| 72-279, gnl|fr1|chrUn (295983327-295983163) | |
| 72-279, gnl|galGal2|chr9 (15745574-15745410) | |
| 72-279, gnl|hg17|chr3 (184074298-184074462) | |
| 72-279, gnl|Hg17|chr3 (184074299-184074506) | |
| 72-279, gnl|loxAfr1|scaffold_6556 (46807-46642) | |
| 72-279, gnl|mm7|chr3 (35627116-35627280) | |
| 72-279, gnl|Mm7|chr3 (35627117-35627324) | |
| 72-279, gnl|monDom2|scaffold_28 (24437811-24437647) | |
| 72-279, gnl|oryCun1|scaffold_208488 (203670-203506) | |
| 72-279, gnl|panTro1|chr2 (187998587-187998751) | |
| 72-279, gnl|rheMac2|chr2 (103825986-103825822) | |
| 72-279, gnl|rn3|chr2 (122208685-122208849) | |
| 72-279, gnl|tetNig1|chrUn_random (45730902-45731066) | |
| 72-279, gnl|xenTro1|scaffold_213 (1077985-1078149) | |
| 431-536, gnl|bosTau2|chr1 (54956825-54956720) | |
| 431-536, gnl|canFam2|chr34 (18886450-18886563) | |
| 431-536, gnl|danRer3|chr22 (48317973-48317860) | |
| 431-536, gnl|dasNov1|scaffold_76071 (204-317) | |
| 431-536, gnl|echTel1|scaffold_308499 (23305-23418) | |
| 431-536, gnl|fr1|chrUn (295982679-295982568) | |
| 431-536, gnl|galGal2|chr9 (15743960-15743847) | |
| 431-536, gnl|hg17|chr3 (184081363-184081476) | |
| 431-536, gnl|Hg17|chr3 (184081367-184081472) | |
| 431-536, gnl|loxAfr1|scaffold_6035 (10935-10822) | |
| 431-536, gnl|mm7|chr3 (35635806-35635919) | |
| 431-536, gnl|Mm7|chr3 (35635810-35635915) | |
| 431-536, gnl|monDom2|scaffold_28 (24433186-24433073) | |
| 431-536, gnl|oryCun1|scaffold_208488 (197450-197337) | |
| 431-536, gnl|panTro1|chr2 (188005717-188005830) | |
| 431-536, gnl|rheMac2|chr2 (103818954-103818841) | |
| 431-536, gnl|rn3|chr2 (122219281-122219394) | |
| 431-536, gnl|tetNig1|chrUn_random (45731487-45731597) | |
| 431-536, gnl|xenTro1|scaffold_213 (1080274-1080387) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 72-279, gnl|bosTau2|chr1 (54991748-54991541) | |
| 72-279, gnl|canFam2|chr34 (18880963-18881127) | |
| 72-279, gnl|danRer3|chr22 (48324241-48324077) | |
| 72-279, gnl|dasNov1|scaffold_99442 (2975-3139) | |
| 72-279, gnl|echTel1|scaffold_313867 (1335-1170) | |
| 72-279, gnl|fr1|chrUn (295983327-295983163) | |
| 72-279, gnl|galGal2|chr9 (15745574-15745410) | |
| 72-279, gnl|hg17|chr3 (184074298-184074462) | |
| 72-279, gnl|Hg17|chr3 (184074299-184074506) | |
| 72-279, gnl|loxAfr1|scaffold_6556 (46807-46642) | |
| 72-279, gnl|mm7|chr3 (35627116-35627280) | |
| 72-279, gnl|Mm7|chr3 (35627117-35627324) | |
| 72-279, gnl|monDom2|scaffold_28 (24437811-24437647) | |
| 72-279, gnl|oryCun1|scaffold_208488 (203670-203506) | |
| 72-279, gnl|panTro1|chr2 (187998587-187998751) | |
| 72-279, gnl|rheMac2|chr2 (103825986-103825822) | |
| 72-279, gnl|rn3|chr2 (122208685-122208849) | |
| 72-279, gnl|tetNig1|chrUn_random (45730902-45731066) | |
| 72-279, gnl|xenTro1|scaffold_213 (1077985-1078149) | |
| 431-536, gnl|bosTau2|chr1 (54956825-54956720) | |
| 431-536, gnl|canFam2|chr34 (18886450-18886563) | |
| 431-536, gnl|danRer3|chr22 (48317973-48317860) | |
| 431-536, gnl|dasNov1|scaffold_76071 (204-317) | |
| 431-536, gnl|echTel1|scaffold_308499 (23305-23418) | |
| 431-536, gnl|fr1|chrUn (295982679-295982568) | |
| 431-536, gnl|galGal2|chr9 (15743960-15743847) | |
| 431-536, gnl|hg17|chr3 (184081363-184081476) | |
| 431-536, gnl|Hg17|chr3 (184081367-184081472) | |
| 431-536, gnl|loxAfr1|scaffold_6035 (10935-10822) | |
| 431-536, gnl|mm7|chr3 (35635806-35635919) | |
| 431-536, gnl|Mm7|chr3 (35635810-35635915) | |
| 431-536, gnl|monDom2|scaffold_28 (24433186-24433073) | |
| 431-536, gnl|oryCun1|scaffold_208488 (197450-197337) | |
| 431-536, gnl|panTro1|chr2 (188005717-188005830) | |
| 431-536, gnl|rheMac2|chr2 (103818954-103818841) | |
| 431-536, gnl|rn3|chr2 (122219281-122219394) | |
| 431-536, gnl|tetNig1|chrUn_random (45731487-45731597) | |
| 431-536, gnl|xenTro1|scaffold_213 (1080274-1080387) |