Non-Coding RNA Search

End1-UMC-pd3end1-002-a01

Sequence:


               
               TGGGTTGTCTTTCTAAGCTTCTGAAATCCAAAGTAGTACAATGCATGGATATTTGAAGCC
ATGCTGCTGCAGCTGCGTCGAACTTTCCCAGGAACGTGTGAGGTGTTCCAAGAACACACA
TGTTCATTCATTCAAGCCTTGAATAAATTCCTGGTTTTGCAGTGTAATGGACAATTCCAG
CTTTGGAATATGAGAGACTTGGACTAGAATCCTGCCTCGCTTACTGTGTTAACCTTAGGC
ATTAAAACAATTCCTCCTAGCCCCAGTTTCTCAGCTGTAAAATGGATCCCTTTTTGAAGG
ATGATTGTGAAATATAAATGAGATGATGTATTAATGGTATACTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGTTGTCTTTCTAAGCTTCTGAAATCCAAAGTAGTACAATGCATGGATATTTGAAGCC
ATGCTGCTGCAGCTGCGTCGAACTTTCCCAGGAACGTGTGAGGTGTTCCAAGAACACACA
TGTTCATTCATTCAAGCCTTGAATAAATTCCTGGTTTTGCAGTGTAATGGACAATTCCAG
CTTTGGAATATGAGAGACTTGGACTAGAATCCTGCCTCGCTTACTGTGTTAACCTTAGGC
ATTAAAACAATTCCTCCTAGCCCCAGTTTCTCAGCTGTAAAATGGATCCCTTTTTGAAGG
ATGATTGTGAAATATAAATGAGATGATGTATTAATGGTATACTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               40-158, + strand, RNAz p=0.840826

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-158, + strand, RNAz p=0.840826

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-336, gnl|bosTau2|chr3 (11070491-11070821)
               

               
               1-336, gnl|Hg17|chr1 (153512396-153512730)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-336, gnl|bosTau2|chr3 (11070491-11070821)
               

               
               1-336, gnl|Hg17|chr1 (153512396-153512730)

	1-336, gnl\|bosTau2\|chr3 (11070491-11070821)
	1-336, gnl\|Hg17\|chr1 (153512396-153512730)