Non-Coding RNA Search

End1-UMC-pd3end3-003-a07

Sequence:


               
               ACTGTCTTTAGTTTGCAAGGTTTCCTTTTAGAAACCCTGGCGACAATGATCCTGCTGTTT
GTAGACCCTGTTCTTTTGCTGCTGTCAGGATGACCTGTGCTAAAATAGTTTCTTTTTAAA
GTTTTTCTGGATTCTGAAAGGGAGTGGAAAGTTAGATGTCTTAGGGAATGACATTGTGAA
TCCTATTATTTTGACAGATTTTGGTGTTACCCTTATGCATCTCTAAGGCATTAGCATGGA
CATGAAAGACAACGATTCAAAATACTTGAAAATTTATTTCCACTTAGGAAAATAAGAAAT
TCAGCTGTTGATAAACAGACAATGACCTAAACAAGATTAAGTTAAAATAATAAAGAAAAA
TTCATAGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGTCTTTAGTTTGCAAGGTTTCCTTTTAGAAACCCTGGCGACAATGATCCTGCTGTTT
GTAGACCCTGTTCTTTTGCTGCTGTCAGGATGACCTGTGCTAAAATAGTTTCTTTTTAAA
GTTTTTCTGGATTCTGAAAGGGAGTGGAAAGTTAGATGTCTTAGGGAATGACATTGTGAA
TCCTATTATTTTGACAGATTTTGGTGTTACCCTTATGCATCTCTAAGGCATTAGCATGGA
CATGAAAGACAACGATTCAAAATACTTGAAAATTTATTTCCACTTAGGAAAATAAGAAAT
TCAGCTGTTGATAAACAGACAATGACCTAAACAAGATTAAGTTAAAATAATAAAGAAAAA
TTCATAGTCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-115, + strand, RNAz p=0.701942

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-115, + strand, RNAz p=0.701942

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-292, gnl|bosTau2|chr13 (21683614-21683317)
               

               
               1-292, gnl|Hg17|chr10 (28139223-28138925)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-292, gnl|bosTau2|chr13 (21683614-21683317)
               

               
               1-292, gnl|Hg17|chr10 (28139223-28138925)

	1-292, gnl\|bosTau2\|chr13 (21683614-21683317)
	1-292, gnl\|Hg17\|chr10 (28139223-28138925)