Non-Coding RNA Search

End1-UMC-pd3end3-009-c10

Sequence:


               
               AATTCTGATCTGGCCAAAAAGATTCTGGAACAGGCCAATGACCTATAGGAACCCCAGTTT
TAGGATTTGGTCTGACATATATGAGTTTGTGACAACTATGCCAAGGCTGGGATCCAAAAG
GCCTTGATATATCTGGCTGCCCATCTTCTACAGGGGAAGGATCTGGTCCTGCTTTTTCAA
AGTTTATTACTACCCCACTTTGTACTTTCTGCACCAAGGACTCCAGACACTGATTAAGCA
TCCTTGGAGAACATACAGAGTATGAGCGGCCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTCTGATCTGGCCAAAAAGATTCTGGAACAGGCCAATGACCTATAGGAACCCCAGTTT
TAGGATTTGGTCTGACATATATGAGTTTGTGACAACTATGCCAAGGCTGGGATCCAAAAG
GCCTTGATATATCTGGCTGCCCATCTTCTACAGGGGAAGGATCTGGTCCTGCTTTTTCAA
AGTTTATTACTACCCCACTTTGTACTTTCTGCACCAAGGACTCCAGACACTGATTAAGCA
TCCTTGGAGAACATACAGAGTATGAGCGGCCGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-146, + strand, RNAz p=0.80555

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-146, + strand, RNAz p=0.80555

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-146, gnl|bosTau2|chr12 (10579551-10579696)
               

               
               1-146, gnl|Hg17|chr13 (50859534-50859679)
               

               
               1-146, gnl|Mm7|chr14 (57579909-57580054)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-146, gnl|bosTau2|chr12 (10579551-10579696)
               

               
               1-146, gnl|Hg17|chr13 (50859534-50859679)
               

               
               1-146, gnl|Mm7|chr14 (57579909-57580054)

	1-146, gnl\|bosTau2\|chr12 (10579551-10579696)
	1-146, gnl\|Hg17\|chr13 (50859534-50859679)
	1-146, gnl\|Mm7\|chr14 (57579909-57580054)