Non-Coding RNA Search

End1-UMC-pd3end3-020-c05

Sequence:


               
               ATTAGTTCCTCCACAGGCATTTTGCTGGACGAATGGACCAATGGAAGTGGCAAACCCACT
AGGTGTTCACCCCCTCAGCCTAAAAGGCCCCCTTTCCCAGGACTGAGGCCCTGGAGAGGA
TGTTAATTGACACAAGTTTTCAAAAAgcagtttggcaacgtgtagcaaaagccttaaaaa
tgttcatacttttgatccaacacccccgcttctgggactctgtcctaaggaCATTCTCCA
AATGATGGATACGGAGACTGTGTAGTAACATGAAATGTTTATGATGTAATCATAAACAAG
TCTGGAAGAACTGACCAAGAAATTGTTGTATTACCCGAATGGATTTATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTAGTTCCTCCACAGGCATTTTGCTGGACGAATGGACCAATGGAAGTGGCAAACCCACT
AGGTGTTCACCCCCTCAGCCTAAAAGGCCCCCTTTCCCAGGACTGAGGCCCTGGAGAGGA
TGTTAATTGACACAAGTTTTCAAAAAgcagtttggcaacgtgtagcaaaagccttaaaaa
tgttcatacttttgatccaacacccccgcttctgggactctgtcctaaggaCATTCTCCA
AATGATGGATACGGAGACTGTGTAGTAACATGAAATGTTTATGATGTAATCATAAACAAG
TCTGGAAGAACTGACCAAGAAATTGTTGTATTACCCGAATGGATTTATC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               211-325, + strand, RNAz p=0.513606

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               211-325, + strand, RNAz p=0.513606

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               54-325, gnl|bosTau2|chr3 (68193330-68193055)
               

               
               54-325, gnl|Hg17|chr1 (44980169-44979892)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               54-325, gnl|bosTau2|chr3 (68193330-68193055)
               

               
               54-325, gnl|Hg17|chr1 (44980169-44979892)

	54-325, gnl\|bosTau2\|chr3 (68193330-68193055)
	54-325, gnl\|Hg17\|chr1 (44980169-44979892)