Non-Coding RNA Search

End3-UMC-pd6end1-008-b05

Sequence:


               
               GAACCCAGAGTCATCCTCAACCCAAGACTTAACAACAGCGAACACAGGTGGAGCCCATTC
TTATGCTGGACGCATTGCCAAGGGGGTTGCCTCACTCCATACTCACCCCTGGTCCTGCCC
GAGAAGCCCTCAGCGGTCACAGCTTTTGCCCTTGGTCAGCAGCAGGGCTGGGATTTCAAG
CCCCATGGGTGTGATGCTGGAGGCTGTGCTCTTAGCCAGCCTGCCATTCTTCCCAGGGGG
CCTGTCTGATGATTCATTTCTTATTCTACACCCAGAGACAGTGAGGCGTAAACCAGAATA
AAAGGGGGCTATTATGATACCACTATTTGCCGTTTATTTAAATTGGATAATAAATCACAG
AGCTACTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAACCCAGAGTCATCCTCAACCCAAGACTTAACAACAGCGAACACAGGTGGAGCCCATTC
TTATGCTGGACGCATTGCCAAGGGGGTTGCCTCACTCCATACTCACCCCTGGTCCTGCCC
GAGAAGCCCTCAGCGGTCACAGCTTTTGCCCTTGGTCAGCAGCAGGGCTGGGATTTCAAG
CCCCATGGGTGTGATGCTGGAGGCTGTGCTCTTAGCCAGCCTGCCATTCTTCCCAGGGGG
CCTGTCTGATGATTCATTTCTTATTCTACACCCAGAGACAGTGAGGCGTAAACCAGAATA
AAAGGGGGCTATTATGATACCACTATTTGCCGTTTATTTAAATTGGATAATAAATCACAG
AGCTACTTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               133-292, - strand, RNAz p=0.971133

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               133-292, - strand, RNAz p=0.971133

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               15-369, gnl|bosTau2|chr18 (14593518-14593163)
               

               
               15-369, gnl|Hg17|chr16 (66997304-66997654)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-369, gnl|bosTau2|chr18 (14593518-14593163)
               

               
               15-369, gnl|Hg17|chr16 (66997304-66997654)

	15-369, gnl\|bosTau2\|chr18 (14593518-14593163)
	15-369, gnl\|Hg17\|chr16 (66997304-66997654)