Non-Coding RNA Search

End3-UMC-pd6end1-008-h01

Sequence:


               
               ATAGACACTGTACAGAACACGAGGCAAGTGATAATTAGGTGTAGCATAAAAGCATTCTCA
TGTTACTCAGATATTTTGTAAAGCAAAGCTATTGTATACCCTTTTACTTAGGAAATTGAA
GCTCAAGAAGGTGAAGATGATACCTTTCTAACAGCCCAAGTAAGTTTACATTTAGTCCTA
TGAATTTGATATTGTGGGTGGAAGGGCTTGGAAAAGGAATCTTACTTTGTCTTCATAGTT
CTTTACTTCATAAAATTGCCTTTAATTTAATACTGTGTTATTTATGTGGTATATATGAAA
TACTTAAAATTGGCAGCTGAGATTTGTTGCCATGCAGATAATTGGAAGTTATTACAAGGT
TCCTACCATTTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAGACACTGTACAGAACACGAGGCAAGTGATAATTAGGTGTAGCATAAAAGCATTCTCA
TGTTACTCAGATATTTTGTAAAGCAAAGCTATTGTATACCCTTTTACTTAGGAAATTGAA
GCTCAAGAAGGTGAAGATGATACCTTTCTAACAGCCCAAGTAAGTTTACATTTAGTCCTA
TGAATTTGATATTGTGGGTGGAAGGGCTTGGAAAAGGAATCTTACTTTGTCTTCATAGTT
CTTTACTTCATAAAATTGCCTTTAATTTAATACTGTGTTATTTATGTGGTATATATGAAA
TACTTAAAATTGGCAGCTGAGATTTGTTGCCATGCAGATAATTGGAAGTTATTACAAGGT
TCCTACCATTTTC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               120-236, + strand, RNAz p=0.639199

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               120-236, + strand, RNAz p=0.639199

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-373, gnl|bosTau2|chr28 (31553858-31553484)
               

               
               1-373, gnl|Hg17|chr15 (56992213-56991524)
               

               
               1-373, gnl|Mm7|chr9 (70594657-70594999)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-373, gnl|bosTau2|chr28 (31553858-31553484)
               

               
               1-373, gnl|Hg17|chr15 (56992213-56991524)
               

               
               1-373, gnl|Mm7|chr9 (70594657-70594999)

	1-373, gnl\|bosTau2\|chr28 (31553858-31553484)
	1-373, gnl\|Hg17\|chr15 (56992213-56991524)
	1-373, gnl\|Mm7\|chr9 (70594657-70594999)