Non-Coding RNA Search

Fat1-C94607

Sequence:


               
               GTGTTATTCCCTCTCAGGGTCTCTGGTGAAGACCTTCAAGAGTTTGGTTTTTCTCCCAGA
AATTGGAAGGTAGAATGTAAATCATAGACTTATTTATAATGTGTACCTCAANACTGCCTT
CAATTATGCCAATCCTTATGAGTTATACTGAATAGTAAATANGTCTCNGAGTTTACAGTG
NCTAAATTCATGCACATTTTTTTCTTCCTTCCCAACCTTCTGGTTGTAGTCATCAATGTC
CTATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGTTATTCCCTCTCAGGGTCTCTGGTGAAGACCTTCAAGAGTTTGGTTTTTCTCCCAGA
AATTGGAAGGTAGAATGTAAATCATAGACTTATTTATAATGTGTACCTCAANACTGCCTT
CAATTATGCCAATCCTTATGAGTTATACTGAATAGTAAATANGTCTCNGAGTTTACAGTG
NCTAAATTCATGCACATTTTTTTCTTCCTTCCCAACCTTCTGGTTGTAGTCATCAATGTC
CTATC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               1-99, + strand, RNAz p=0.844269

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-99, + strand, RNAz p=0.844269

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               1-244, gnl|bosTau2|chr18 (24167322-24167055)
               

               
               1-244, gnl|canFam2|chr2 (62020118-62019795)
               

               
               1-244, gnl|dasNov1|scaffold_118293 (4005-3694)
               

               
               1-244, gnl|echTel1|scaffold_267389 (607-938)
               

               
               1-244, gnl|hg17|chr16 (55831388-55831714)
               

               
               1-244, gnl|Hg17|chr16 (55831405-55831675)
               

               
               1-244, gnl|loxAfr1|scaffold_2911 (65674-65995)
               

               
               1-244, gnl|mm7|chr8 (93248820-93249160)
               

               
               1-244, gnl|Mm7|chr8 (93248837-93249121)
               

               
               1-244, gnl|monDom2|scaffold_35 (24111633-24111966)
               

               
               1-244, gnl|oryCun1|scaffold_210892 (7145-6821)
               

               
               1-244, gnl|panTro1|chr18 (49932165-49932491)
               

               
               1-244, gnl|rheMac2|chr20 (55599237-55599564)
               

               
               1-244, gnl|rn3|chr19 (10798113-10797778)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-244, gnl|bosTau2|chr18 (24167322-24167055)
               

               
               1-244, gnl|canFam2|chr2 (62020118-62019795)
               

               
               1-244, gnl|dasNov1|scaffold_118293 (4005-3694)
               

               
               1-244, gnl|echTel1|scaffold_267389 (607-938)
               

               
               1-244, gnl|hg17|chr16 (55831388-55831714)
               

               
               1-244, gnl|Hg17|chr16 (55831405-55831675)
               

               
               1-244, gnl|loxAfr1|scaffold_2911 (65674-65995)
               

               
               1-244, gnl|mm7|chr8 (93248820-93249160)
               

               
               1-244, gnl|Mm7|chr8 (93248837-93249121)
               

               
               1-244, gnl|monDom2|scaffold_35 (24111633-24111966)
               

               
               1-244, gnl|oryCun1|scaffold_210892 (7145-6821)
               

               
               1-244, gnl|panTro1|chr18 (49932165-49932491)
               

               
               1-244, gnl|rheMac2|chr20 (55599237-55599564)
               

               
               1-244, gnl|rn3|chr19 (10798113-10797778)

	1-244, gnl\|bosTau2\|chr18 (24167322-24167055)
	1-244, gnl\|canFam2\|chr2 (62020118-62019795)
	1-244, gnl\|dasNov1\|scaffold_118293 (4005-3694)
	1-244, gnl\|echTel1\|scaffold_267389 (607-938)
	1-244, gnl\|hg17\|chr16 (55831388-55831714)
	1-244, gnl\|Hg17\|chr16 (55831405-55831675)
	1-244, gnl\|loxAfr1\|scaffold_2911 (65674-65995)
	1-244, gnl\|mm7\|chr8 (93248820-93249160)
	1-244, gnl\|Mm7\|chr8 (93248837-93249121)
	1-244, gnl\|monDom2\|scaffold_35 (24111633-24111966)
	1-244, gnl\|oryCun1\|scaffold_210892 (7145-6821)
	1-244, gnl\|panTro1\|chr18 (49932165-49932491)
	1-244, gnl\|rheMac2\|chr20 (55599237-55599564)
	1-244, gnl\|rn3\|chr19 (10798113-10797778)