Fat1-PT14D4
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CATTCAAGAGAAGCTTGTATTGGGGAAGATACTGACTGTATTCGTGGCAAACTTGAAGTA TTAAAAATAAGGCTGTCCCTACAACCTTTCTAGTCACACACAGGTTCCCTGTAGCCAAAA CAGTATATGTTCCAGCTGCAGAGAGCAGGTTGCTCTCAGCTTGCACAGCACCTTANGGGA GGGAAGAATNAATGGATGGGGAATGGGGTGGAGAAAGGAGGATGGGAATGTTGTCATNCA GGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CATTCAAGAGAAGCTTGTATTGGGGAAGATACTGACTGTATTCGTGGCAAACTTGAAGTA TTAAAAATAAGGCTGTCCCTACAACCTTTCTAGTCACACACAGGTTCCCTGTAGCCAAAA CAGTATATGTTCCAGCTGCAGAGAGCAGGTTGCTCTCAGCTTGCACAGCACCTTANGGGA GGGAAGAATNAATGGATGGGGAATGGGGTGGAGAAAGGAGGATGGGAATGTTGTCATNCA GGT |
| Predicted RNA structure(s): 4 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
| 36-243, - strand, RNAz p=0.959278 | |
| 41-190, - strand, RNAz p=0.914829 | |
| 52-243, - strand, RNAz p=0.983656 | |
| 107-243, - strand, RNAz p=0.999088 |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 36-243, - strand, RNAz p=0.959278 | |
| 41-190, - strand, RNAz p=0.914829 | |
| 52-243, - strand, RNAz p=0.983656 | |
| 107-243, - strand, RNAz p=0.999088 |
| Aligned organism(s): 59 entry(ies) | More info |
| Aligned organism(s): 59 entry(ies) | Help | Less info |
| 1-243, gnl|bosTau2|chr18 (32346383-32346139) | |
| 1-243, gnl|canFam2|chr5 (80633314-80633549) | |
| 1-243, gnl|canFam2|chr5 (80633311-80633608) | |
| 1-243, gnl|canFam2|chr5 (80633311-80633608) | |
| 1-243, gnl|canFam2|chr5 (80633608-80633270) | |
| 1-243, gnl|canFam2|chr5 (28855007-28854756) | |
| 1-243, gnl|dasNov1|scaffold_12749 (1336-1565) | |
| 1-243, gnl|dasNov1|scaffold_12749 (1333-1624) | |
| 1-243, gnl|dasNov1|scaffold_12749 (1333-1624) | |
| 1-243, gnl|dasNov1|scaffold_12749 (1624-1333) | |
| 1-243, gnl|dasNov1|scaffold_12749 (1328-1565) | |
| 1-243, gnl|echTel1|scaffold_286429 (36589-36890) | |
| 1-243, gnl|echTel1|scaffold_286429 (36589-36890) | |
| 1-243, gnl|echTel1|scaffold_286429 (36890-36561) | |
| 1-243, gnl|echTel1|scaffold_303027 (554-798) | |
| 1-243, gnl|echTel1|scaffold_62781 (1281-1040) | |
| 1-243, gnl|galGal2|chr11_random (919714-919566) | |
| 1-243, gnl|hg17|chr10 (51020486-51020779) | |
| 1-243, gnl|hg17|chr10 (50798852-50799145) | |
| 1-243, gnl|hg17|chr10 (51313974-51314317) | |
| 1-243, gnl|hg17|chr11 (105848268-105848514) | |
| 1-243, gnl|hg17|chr16 (70447946-70448180) | |
| 1-243, gnl|Hg17|chr16 (70447990-70448231) | |
| 1-243, gnl|loxAfr1|scaffold_59812 (7234-7012) | |
| 1-243, gnl|loxAfr1|scaffold_59812 (7237-6951) | |
| 1-243, gnl|loxAfr1|scaffold_59812 (7237-6951) | |
| 1-243, gnl|loxAfr1|scaffold_59812 (6951-7266) | |
| 1-243, gnl|loxAfr1|scaffold_59812 (7242-7012) | |
| 1-243, gnl|mm7|chr8 (108327369-108327143) | |
| 1-243, gnl|mm7|chr8 (108327372-108327086) | |
| 1-243, gnl|mm7|chr8 (108327372-108327086) | |
| 1-243, gnl|mm7|chr8 (108327086-108327415) | |
| 1-243, gnl|mm7|chr8 (108327377-108327146) | |
| 1-243, gnl|Mm7|chr8 (108327318-108327091) | |
| 1-243, gnl|monDom2|scaffold_23 (1064175-1064392) | |
| 1-243, gnl|monDom2|scaffold_23 (1064145-1064450) | |
| 1-243, gnl|monDom2|scaffold_23 (1064188-1064450) | |
| 1-243, gnl|monDom2|scaffold_23 (1064450-1064096) | |
| 1-243, gnl|monDom2|scaffold_23 (1064171-1064392) | |
| 1-243, gnl|oryCun1|scaffold_163861 (22174-22411) | |
| 1-243, gnl|oryCun1|scaffold_209525 (156043-155810) | |
| 1-243, gnl|oryCun1|scaffold_209525 (156046-155749) | |
| 1-243, gnl|oryCun1|scaffold_209525 (156046-155749) | |
| 1-243, gnl|oryCun1|scaffold_209525 (155749-156090) | |
| 1-243, gnl|panTro1|chr18_random (37423347-37423114) | |
| 1-243, gnl|panTro1|chr8 (51190112-51190405) | |
| 1-243, gnl|panTro1|chr8 (51190112-51190405) | |
| 1-243, gnl|panTro1|chr8 (51190405-51190062) | |
| 1-243, gnl|panTro1|chr9 (107807393-107807639) | |
| 1-243, gnl|rheMac2|chr14 (105091749-105091995) | |
| 1-243, gnl|rheMac2|chr20 (70794786-70794552) | |
| 1-243, gnl|rheMac2|chr9 (46701959-46701662) | |
| 1-243, gnl|rheMac2|chr9 (46701959-46701662) | |
| 1-243, gnl|rheMac2|chr9 (46701662-46702010) | |
| 1-243, gnl|rn3|chr19 (39611371-39611147) | |
| 1-243, gnl|rn3|chr19 (39611374-39611091) | |
| 1-243, gnl|rn3|chr19 (39611374-39611091) | |
| 1-243, gnl|rn3|chr19 (39611091-39611417) | |
| 1-243, gnl|rn3|chr19 (39611379-39611150) |
| Aligned organism(s): 59 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-243, gnl|bosTau2|chr18 (32346383-32346139) | |
| 1-243, gnl|canFam2|chr5 (80633314-80633549) | |
| 1-243, gnl|canFam2|chr5 (80633311-80633608) | |
| 1-243, gnl|canFam2|chr5 (80633311-80633608) | |
| 1-243, gnl|canFam2|chr5 (80633608-80633270) | |
| 1-243, gnl|canFam2|chr5 (28855007-28854756) | |
| 1-243, gnl|dasNov1|scaffold_12749 (1336-1565) | |
| 1-243, gnl|dasNov1|scaffold_12749 (1333-1624) | |
| 1-243, gnl|dasNov1|scaffold_12749 (1333-1624) | |
| 1-243, gnl|dasNov1|scaffold_12749 (1624-1333) | |
| 1-243, gnl|dasNov1|scaffold_12749 (1328-1565) | |
| 1-243, gnl|echTel1|scaffold_286429 (36589-36890) | |
| 1-243, gnl|echTel1|scaffold_286429 (36589-36890) | |
| 1-243, gnl|echTel1|scaffold_286429 (36890-36561) | |
| 1-243, gnl|echTel1|scaffold_303027 (554-798) | |
| 1-243, gnl|echTel1|scaffold_62781 (1281-1040) | |
| 1-243, gnl|galGal2|chr11_random (919714-919566) | |
| 1-243, gnl|hg17|chr10 (51020486-51020779) | |
| 1-243, gnl|hg17|chr10 (50798852-50799145) | |
| 1-243, gnl|hg17|chr10 (51313974-51314317) | |
| 1-243, gnl|hg17|chr11 (105848268-105848514) | |
| 1-243, gnl|hg17|chr16 (70447946-70448180) | |
| 1-243, gnl|Hg17|chr16 (70447990-70448231) | |
| 1-243, gnl|loxAfr1|scaffold_59812 (7234-7012) | |
| 1-243, gnl|loxAfr1|scaffold_59812 (7237-6951) | |
| 1-243, gnl|loxAfr1|scaffold_59812 (7237-6951) | |
| 1-243, gnl|loxAfr1|scaffold_59812 (6951-7266) | |
| 1-243, gnl|loxAfr1|scaffold_59812 (7242-7012) | |
| 1-243, gnl|mm7|chr8 (108327369-108327143) | |
| 1-243, gnl|mm7|chr8 (108327372-108327086) | |
| 1-243, gnl|mm7|chr8 (108327372-108327086) | |
| 1-243, gnl|mm7|chr8 (108327086-108327415) | |
| 1-243, gnl|mm7|chr8 (108327377-108327146) | |
| 1-243, gnl|Mm7|chr8 (108327318-108327091) | |
| 1-243, gnl|monDom2|scaffold_23 (1064175-1064392) | |
| 1-243, gnl|monDom2|scaffold_23 (1064145-1064450) | |
| 1-243, gnl|monDom2|scaffold_23 (1064188-1064450) | |
| 1-243, gnl|monDom2|scaffold_23 (1064450-1064096) | |
| 1-243, gnl|monDom2|scaffold_23 (1064171-1064392) | |
| 1-243, gnl|oryCun1|scaffold_163861 (22174-22411) | |
| 1-243, gnl|oryCun1|scaffold_209525 (156043-155810) | |
| 1-243, gnl|oryCun1|scaffold_209525 (156046-155749) | |
| 1-243, gnl|oryCun1|scaffold_209525 (156046-155749) | |
| 1-243, gnl|oryCun1|scaffold_209525 (155749-156090) | |
| 1-243, gnl|panTro1|chr18_random (37423347-37423114) | |
| 1-243, gnl|panTro1|chr8 (51190112-51190405) | |
| 1-243, gnl|panTro1|chr8 (51190112-51190405) | |
| 1-243, gnl|panTro1|chr8 (51190405-51190062) | |
| 1-243, gnl|panTro1|chr9 (107807393-107807639) | |
| 1-243, gnl|rheMac2|chr14 (105091749-105091995) | |
| 1-243, gnl|rheMac2|chr20 (70794786-70794552) | |
| 1-243, gnl|rheMac2|chr9 (46701959-46701662) | |
| 1-243, gnl|rheMac2|chr9 (46701959-46701662) | |
| 1-243, gnl|rheMac2|chr9 (46701662-46702010) | |
| 1-243, gnl|rn3|chr19 (39611371-39611147) | |
| 1-243, gnl|rn3|chr19 (39611374-39611091) | |
| 1-243, gnl|rn3|chr19 (39611374-39611091) | |
| 1-243, gnl|rn3|chr19 (39611091-39611417) | |
| 1-243, gnl|rn3|chr19 (39611379-39611150) |