Non-Coding RNA Search

Fat1-PT28F7

Sequence:


               
               ATCCCAGGATATTACCTTCGTGTGGCTAGCATTTAATGTTCTAATATTAAAGTTTGAAGC
ACCAACGGGCTGTGTCTTAAAAGGCTCATTCAGCCTGTCTGCCTTGGAGCTATTTTATTT
ATAAGTCTTCGTGTCAAGTCAAAGAACTCTGTGTTTCTCGTAGACTGCGTTCGGATGGGT
GAGTGTTTTGGTTTTTGGCTACAGCTGGTTAATTTTTCCGAATCTGTAGCTCCAGGTGTG
CGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCCCAGGATATTACCTTCGTGTGGCTAGCATTTAATGTTCTAATATTAAAGTTTGAAGC
ACCAACGGGCTGTGTCTTAAAAGGCTCATTCAGCCTGTCTGCCTTGGAGCTATTTTATTT
ATAAGTCTTCGTGTCAAGTCAAAGAACTCTGTGTTTCTCGTAGACTGCGTTCGGATGGGT
GAGTGTTTTGGTTTTTGGCTACAGCTGGTTAATTTTTCCGAATCTGTAGCTCCAGGTGTG
CGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               2-109, + strand, RNAz p=0.883986

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               2-109, + strand, RNAz p=0.883986

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

Help | Less info


               
               2-242, gnl|bosTau2|chr5 (74128256-74128017)
               

               
               2-242, gnl|canFam2|chr10 (23136494-23135897)
               

               
               2-242, gnl|dasNov1|scaffold_46104 (3992-3379)
               

               
               2-242, gnl|echTel1|scaffold_242229 (4022-3329)
               

               
               2-242, gnl|hg17|chr22 (44781351-44781963)
               

               
               2-242, gnl|Hg17|chr22 (44781350-44781588)
               

               
               2-242, gnl|loxAfr1|scaffold_11871 (24487-23861)
               

               
               2-242, gnl|mm7|chr15 (85746562-85747222)
               

               
               2-242, gnl|Mm7|chr15 (85746598-85746846)
               

               
               2-242, gnl|oryCun1|scaffold_191071 (7752-8290)
               

               
               2-242, gnl|panTro1|chr23 (45096328-45096937)
               

               
               2-242, gnl|rheMac2|chr10 (90074399-90075018)
               

               
               2-242, gnl|rn3|chr7 (123692289-123692894)

Aligned organism(s): 13 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-242, gnl|bosTau2|chr5 (74128256-74128017)
               

               
               2-242, gnl|canFam2|chr10 (23136494-23135897)
               

               
               2-242, gnl|dasNov1|scaffold_46104 (3992-3379)
               

               
               2-242, gnl|echTel1|scaffold_242229 (4022-3329)
               

               
               2-242, gnl|hg17|chr22 (44781351-44781963)
               

               
               2-242, gnl|Hg17|chr22 (44781350-44781588)
               

               
               2-242, gnl|loxAfr1|scaffold_11871 (24487-23861)
               

               
               2-242, gnl|mm7|chr15 (85746562-85747222)
               

               
               2-242, gnl|Mm7|chr15 (85746598-85746846)
               

               
               2-242, gnl|oryCun1|scaffold_191071 (7752-8290)
               

               
               2-242, gnl|panTro1|chr23 (45096328-45096937)
               

               
               2-242, gnl|rheMac2|chr10 (90074399-90075018)
               

               
               2-242, gnl|rn3|chr7 (123692289-123692894)

	2-242, gnl\|bosTau2\|chr5 (74128256-74128017)
	2-242, gnl\|canFam2\|chr10 (23136494-23135897)
	2-242, gnl\|dasNov1\|scaffold_46104 (3992-3379)
	2-242, gnl\|echTel1\|scaffold_242229 (4022-3329)
	2-242, gnl\|hg17\|chr22 (44781351-44781963)
	2-242, gnl\|Hg17\|chr22 (44781350-44781588)
	2-242, gnl\|loxAfr1\|scaffold_11871 (24487-23861)
	2-242, gnl\|mm7\|chr15 (85746562-85747222)
	2-242, gnl\|Mm7\|chr15 (85746598-85746846)
	2-242, gnl\|oryCun1\|scaffold_191071 (7752-8290)
	2-242, gnl\|panTro1\|chr23 (45096328-45096937)
	2-242, gnl\|rheMac2\|chr10 (90074399-90075018)
	2-242, gnl\|rn3\|chr7 (123692289-123692894)