Non-Coding RNA Search

Fet1-UMC-pd20fet-012-c10

Sequence:


               
               CCTCACCTGGCTGGGACTGGGAATCGCCTGTTATCGGGTAAGAGGATCAAGGCTTGACAC
GAGGCATACAGCTGACCTTGACTCCTTGGTCTTCCAAGCACCCTGAAAGTTTGTGATGAT
GGTGGGAAGCAAGCAGGGCAATCTTCTCTAATGAAGAGTTGCTCTTCAAAGCTGTTCAGT
AAACTGAAGTTCAATCTGAACTACAAAATAAAATATTCTTTAAAAATCTCATAAAAACTG
AAACATGAAGCTATATAATAAAAAATGGCATGTTGTTGGGTATAAAAGTTCATAATTTTA
TGAGGTTATCTGTGAGAAAAAGGCAATATGGATATGACGAACCTACTCAATTAAATAAAT
TAATTGATACTTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTCACCTGGCTGGGACTGGGAATCGCCTGTTATCGGGTAAGAGGATCAAGGCTTGACAC
GAGGCATACAGCTGACCTTGACTCCTTGGTCTTCCAAGCACCCTGAAAGTTTGTGATGAT
GGTGGGAAGCAAGCAGGGCAATCTTCTCTAATGAAGAGTTGCTCTTCAAAGCTGTTCAGT
AAACTGAAGTTCAATCTGAACTACAAAATAAAATATTCTTTAAAAATCTCATAAAAACTG
AAACATGAAGCTATATAATAAAAAATGGCATGTTGTTGGGTATAAAAGTTCATAATTTTA
TGAGGTTATCTGTGAGAAAAAGGCAATATGGATATGACGAACCTACTCAATTAAATAAAT
TAATTGATACTTATT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               75-190, - strand, RNAz p=0.777228

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               75-190, - strand, RNAz p=0.777228

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-375, gnl|bosTau2|chr28 (22535174-22534789)
               

               
               1-375, gnl|Hg17|chr10 (74702728-74702338)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-375, gnl|bosTau2|chr28 (22535174-22534789)
               

               
               1-375, gnl|Hg17|chr10 (74702728-74702338)

	1-375, gnl\|bosTau2\|chr28 (22535174-22534789)
	1-375, gnl\|Hg17\|chr10 (74702728-74702338)