Non-Coding RNA Search

Fet1-UMC-pd20fet-015-b04

Sequence:


               
               AAGATAGAAAGTAGGATGATGATTGATAGGGGTTGGAGAGGGAAGTTCATGTGTTAATAT
GAtaccgaatttcagtttgggatgatgaaaaaggtctggagatgggctgtggttatggtt
gtacaataatgtgaatgtattaatgctattaacactaaaaaatggctaaagtggtcaatt
ttatgtATACTTTATGACTAAGTAAGTTAACTGCAGTTGTATACAGAAAGTATAATTGGA
TTTATGTAAAATTCAAAAGTAAGAAAACTATACTgtgcttgcttcagcagcacatatact
aaaattggagcgatacagagaagattagcatggcccatgcgcaaggatgacccgaaattc
aaattcgtgaagcattccatgtttAAAAAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGATAGAAAGTAGGATGATGATTGATAGGGGTTGGAGAGGGAAGTTCATGTGTTAATAT
GAtaccgaatttcagtttgggatgatgaaaaaggtctggagatgggctgtggttatggtt
gtacaataatgtgaatgtattaatgctattaacactaaaaaatggctaaagtggtcaatt
ttatgtATACTTTATGACTAAGTAAGTTAACTGCAGTTGTATACAGAAAGTATAATTGGA
TTTATGTAAAATTCAAAAGTAAGAAAACTATACTgtgcttgcttcagcagcacatatact
aaaattggagcgatacagagaagattagcatggcccatgcgcaaggatgacccgaaattc
aaattcgtgaagcattccatgtttAAAAAAAG

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               275-386, RF00026;U6; (AC093214.2/40627-40522), RaveNnA Score=93.76

ncRNA annotation: 1 entry(ies)

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PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               275-386, RF00026;U6; (AC093214.2/40627-40522), RaveNnA Score=93.76