Non-Coding RNA Search

Fet1-UMC-pd20fet-015-c07

Sequence:


               
               TGGATATTAATTGTCAAGGGAAGATACCACAGTACACTGTTAATGAGTAAAACAAATAAC
TGAACTAAGAGATTTAAAGTTTAGAAACATTATTAAATTTATACCTGCATCATTGGCATC
ATCAAGTTTGGGAATTCCTTTGATTCTGTTATGTTTTACAGCTGAACATTTCTTGTTTAA
CTGGACTTGGGCCTTAAATTTCACCCAGTTTAGGATGCTTTCTACAATACCACAGCCAAT
TGCCTGAAAATGAGAAAATTCATCTTAGGGAAGAGTTTTATCAGAAATTCCGACTACAGA
TGAGCCCCCATAAAAATAAAAATACTTTAAAGATGAAAAGAAGTAGAAAAATTCCTGCGG
CCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGATATTAATTGTCAAGGGAAGATACCACAGTACACTGTTAATGAGTAAAACAAATAAC
TGAACTAAGAGATTTAAAGTTTAGAAACATTATTAAATTTATACCTGCATCATTGGCATC
ATCAAGTTTGGGAATTCCTTTGATTCTGTTATGTTTTACAGCTGAACATTTCTTGTTTAA
CTGGACTTGGGCCTTAAATTTCACCCAGTTTAGGATGCTTTCTACAATACCACAGCCAAT
TGCCTGAAAATGAGAAAATTCATCTTAGGGAAGAGTTTTATCAGAAATTCCGACTACAGA
TGAGCCCCCATAAAAATAAAAATACTTTAAAGATGAAAAGAAGTAGAAAAATTCCTGCGG
CCGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               109-267, + strand, RNAz p=0.715818

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               109-267, + strand, RNAz p=0.715818

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-317, gnl|bosTau2|chr19 (34255361-34255047)
               

               
               1-317, gnl|Hg17|chr17 (35818161-35818540)
               

               
               1-317, gnl|Mm7|chr11 (99120988-99121262)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-317, gnl|bosTau2|chr19 (34255361-34255047)
               

               
               1-317, gnl|Hg17|chr17 (35818161-35818540)
               

               
               1-317, gnl|Mm7|chr11 (99120988-99121262)

	1-317, gnl\|bosTau2\|chr19 (34255361-34255047)
	1-317, gnl\|Hg17\|chr17 (35818161-35818540)
	1-317, gnl\|Mm7\|chr11 (99120988-99121262)