Liv1-LVR010008F05
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ACAGAAGACACGGGAGAGGCACGGGGAACAGCGCCTGTTTGAATGAATCAAAAGAGGAAG
GTCTTTGAACCTCTTGAAAGCAGGAGGCCCCCCTGGAGTGACTTTAAACTGGTTCTTTCC
ATCCTATGTTGAGGTCGGAGGTGAGGTTTCCTGTCTGCCAGGTGCCCGGGCCCCACTGCC
CCGTCCAGAAGCTGAGCTGACCTCGAGGTGCACGGTTTGCCGAGTCCCTACATTTCTTCG
CTTCTCTTCAAAAGGAACATGTGTCAGCCTGTGGGTGCGTGTGTTTTTGCAAACAGCCAC
GCCAGTAGCCAGTCTGGAAGGCTTGTCGCTTGCAAATTGTCCTGGGCCCTGTGTCGCTGG
CGCCTGGCCTCATGGCCAGCTGCCCGAGAGGCAGGACTGAGCCTTCCTTTCTGCCCTGTC
TGGTGGAGGCAGACAGCTGCCTTAGCCGGGGGCAAGGTCAGCGGAGAGCTTAGTGTTCAA
GGTGACTTTTTCCAGTGGTTCCACGTTGACGAGACGGATGGTAAACTGCCTTCCTTCCCT
TTCTGGCATTTCTGGATCTGACTTATCTGGATGGAATTTCTCACCTCTCACGCCCTGCGT
CTGTGTGTGTCATCTCTGACTGACAGGCGTGACCACCTGATTCTCCGTCATTATTGGTAC
ACACGCTTCATGGATCGGGAATCCAGTTACTGTTTGGCATGTGTGCTTGGTGG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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ACAGAAGACACGGGAGAGGCACGGGGAACAGCGCCTGTTTGAATGAATCAAAAGAGGAAG
GTCTTTGAACCTCTTGAAAGCAGGAGGCCCCCCTGGAGTGACTTTAAACTGGTTCTTTCC
ATCCTATGTTGAGGTCGGAGGTGAGGTTTCCTGTCTGCCAGGTGCCCGGGCCCCACTGCC
CCGTCCAGAAGCTGAGCTGACCTCGAGGTGCACGGTTTGCCGAGTCCCTACATTTCTTCG
CTTCTCTTCAAAAGGAACATGTGTCAGCCTGTGGGTGCGTGTGTTTTTGCAAACAGCCAC
GCCAGTAGCCAGTCTGGAAGGCTTGTCGCTTGCAAATTGTCCTGGGCCCTGTGTCGCTGG
CGCCTGGCCTCATGGCCAGCTGCCCGAGAGGCAGGACTGAGCCTTCCTTTCTGCCCTGTC
TGGTGGAGGCAGACAGCTGCCTTAGCCGGGGGCAAGGTCAGCGGAGAGCTTAGTGTTCAA
GGTGACTTTTTCCAGTGGTTCCACGTTGACGAGACGGATGGTAAACTGCCTTCCTTCCCT
TTCTGGCATTTCTGGATCTGACTTATCTGGATGGAATTTCTCACCTCTCACGCCCTGCGT
CTGTGTGTGTCATCTCTGACTGACAGGCGTGACCACCTGATTCTCCGTCATTATTGGTAC
ACACGCTTCATGGATCGGGAATCCAGTTACTGTTTGGCATGTGTGCTTGGTGG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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369-477, + strand, RNAmicro p=0.996263 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
369-477, + strand, RNAmicro p=0.996263 |
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40-713, gnl|bosTau2|chr13 (58577898-58578545) |
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40-713, gnl|canFam2|chr24 (40724180-40724770) |
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40-713, gnl|dasNov1|scaffold_76245 (2624-2045) |
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40-713, gnl|echTel1|scaffold_297962 (15896-16481) |
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40-713, gnl|hg17|chr20 (49583281-49583857) |
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40-713, gnl|Hg17|chr20 (49584003-49583315) |
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40-713, gnl|loxAfr1|scaffold_216886 (174-757) |
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40-713, gnl|mm7|chr2 (168372307-168372832) |
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40-713, gnl|Mm7|chr2 (168372914-168372332) |
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40-713, gnl|oryCun1|scaffold_174387 (58027-58589) |
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40-713, gnl|panTro1|chr21 (52346717-52347295) |
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40-713, gnl|rheMac2|chr10 (12930946-12930366) |
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40-713, gnl|rn3|chr3 (159667564-159668092) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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40-713, gnl|bosTau2|chr13 (58577898-58578545) |
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40-713, gnl|canFam2|chr24 (40724180-40724770) |
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40-713, gnl|dasNov1|scaffold_76245 (2624-2045) |
|
40-713, gnl|echTel1|scaffold_297962 (15896-16481) |
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40-713, gnl|hg17|chr20 (49583281-49583857) |
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40-713, gnl|Hg17|chr20 (49584003-49583315) |
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40-713, gnl|loxAfr1|scaffold_216886 (174-757) |
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40-713, gnl|mm7|chr2 (168372307-168372832) |
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40-713, gnl|Mm7|chr2 (168372914-168372332) |
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40-713, gnl|oryCun1|scaffold_174387 (58027-58589) |
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40-713, gnl|panTro1|chr21 (52346717-52347295) |
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40-713, gnl|rheMac2|chr10 (12930946-12930366) |
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40-713, gnl|rn3|chr3 (159667564-159668092) |
