Liv1-LVR010010F01
|
CCCCATGCCCGACACCTTCTCCTATGGAAAAGCCGTTTTTCTCGCGAGAGACAAGCACCA
CCTCTCAGACATCTGCCACCTGGTCCGCCACGACGTGCCCTACCTGTTCCAGAAGTACGT
GAAGGAGTCCCACGGGAAGGACATCCGCGTGGTGGTGGTCGGCGGCCAGGTGATCGGCTC
GATGCTGCGCTGCTCCACGGACGGCCGGATGCAGAGCAACTGCTCGCTCGGTGGCGTGGG
CGTCATGTGCCCGCTGACGGAACAAGGCAAGCAGCTGGCCATCCAGGTGTCCAACATCCT
GGGCATGGACTTCTGCGGCATCGACCTTCTCATCATGGACGACGGCTCCTTCGTGGTGTG
CGAGGCCAACGCCAACGTGGGCTTCCTCGCCTTCGACCAGGCGTGCAACTTGGACGTGGG
CAGCATCATCGCGGACTACACCATGACCTTGCTGCCCAGCAGGCCCACCGGGCACATGGC
CGTCCTCCCCGGGCTGTCCGGTCCCAGGGAGCAGAAGGAGCCCGACGGCTGCGGGTCCGC
GCAGGGCATCGGCGCCGAGAGCGGCTACGCCGTCAACAGCGGGTCGACGTCCAGCGAGAG
CGAGCCCGAACTGGGGGAGAGCCGGGCCTCCGCCGCCGGCTCGGCAGGCGCCCCGGCCCC
CGTGCTGCCGGAGCCCGGCTACAACATGAACACCAGGATTGCGGCAGAGTTGAAACTGAA
GTGAATTCCTGCTTTTTGGCAGATTGAAACCAAATCCGCCTGCTTCCCTAGTAGTTTTGA
G
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCCCATGCCCGACACCTTCTCCTATGGAAAAGCCGTTTTTCTCGCGAGAGACAAGCACCA
CCTCTCAGACATCTGCCACCTGGTCCGCCACGACGTGCCCTACCTGTTCCAGAAGTACGT
GAAGGAGTCCCACGGGAAGGACATCCGCGTGGTGGTGGTCGGCGGCCAGGTGATCGGCTC
GATGCTGCGCTGCTCCACGGACGGCCGGATGCAGAGCAACTGCTCGCTCGGTGGCGTGGG
CGTCATGTGCCCGCTGACGGAACAAGGCAAGCAGCTGGCCATCCAGGTGTCCAACATCCT
GGGCATGGACTTCTGCGGCATCGACCTTCTCATCATGGACGACGGCTCCTTCGTGGTGTG
CGAGGCCAACGCCAACGTGGGCTTCCTCGCCTTCGACCAGGCGTGCAACTTGGACGTGGG
CAGCATCATCGCGGACTACACCATGACCTTGCTGCCCAGCAGGCCCACCGGGCACATGGC
CGTCCTCCCCGGGCTGTCCGGTCCCAGGGAGCAGAAGGAGCCCGACGGCTGCGGGTCCGC
GCAGGGCATCGGCGCCGAGAGCGGCTACGCCGTCAACAGCGGGTCGACGTCCAGCGAGAG
CGAGCCCGAACTGGGGGAGAGCCGGGCCTCCGCCGCCGGCTCGGCAGGCGCCCCGGCCCC
CGTGCTGCCGGAGCCCGGCTACAACATGAACACCAGGATTGCGGCAGAGTTGAAACTGAA
GTGAATTCCTGCTTTTTGGCAGATTGAAACCAAATCCGCCTGCTTCCCTAGTAGTTTTGA
G
|
|
gi|55665379|emb|CAH70659.1| |
Protein identifier
|
gi|55665379|emb|CAH70659.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
230-781, gnl|bosTau2|chr11 (42472158-42472707) |
|
230-781, gnl|canFam2|chr15 (3856852-3856432) |
|
230-781, gnl|danRer3|chr8 (21980424-21980890) |
|
230-781, gnl|dasNov1|scaffold_23815 (10387-9975) |
|
230-781, gnl|echTel1|scaffold_324621 (51142-50722) |
|
230-781, gnl|fr1|chrUn (29342599-29343032) |
|
230-781, gnl|galGal2|chr1 (68444816-68444405) |
|
230-781, gnl|hg17|chr1 (42549247-42549667) |
|
230-781, gnl|Hg17|chr1 (42549247-42549796) |
|
230-781, gnl|loxAfr1|scaffold_60896 (4063-4483) |
|
230-781, gnl|mm7|chr4 (118844967-118844547) |
|
230-781, gnl|Mm7|chr4 (118844965-118844422) |
|
230-781, gnl|monDom2|scaffold_43 (4260486-4260066) |
|
230-781, gnl|oryCun1|scaffold_127977 (12332-11912) |
|
230-781, gnl|panTro1|chr1 (43519243-43519663) |
|
230-781, gnl|rheMac2|chr1 (45309435-45309855) |
|
230-781, gnl|rn3|chr5 (140067732-140067312) |
|
230-781, gnl|tetNig1|chr9 (1790498-1790940) |
|
230-781, gnl|xenTro1|scaffold_225 (985393-984977) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
230-781, gnl|bosTau2|chr11 (42472158-42472707) |
|
230-781, gnl|canFam2|chr15 (3856852-3856432) |
|
230-781, gnl|danRer3|chr8 (21980424-21980890) |
|
230-781, gnl|dasNov1|scaffold_23815 (10387-9975) |
|
230-781, gnl|echTel1|scaffold_324621 (51142-50722) |
|
230-781, gnl|fr1|chrUn (29342599-29343032) |
|
230-781, gnl|galGal2|chr1 (68444816-68444405) |
|
230-781, gnl|hg17|chr1 (42549247-42549667) |
|
230-781, gnl|Hg17|chr1 (42549247-42549796) |
|
230-781, gnl|loxAfr1|scaffold_60896 (4063-4483) |
|
230-781, gnl|mm7|chr4 (118844967-118844547) |
|
230-781, gnl|Mm7|chr4 (118844965-118844422) |
|
230-781, gnl|monDom2|scaffold_43 (4260486-4260066) |
|
230-781, gnl|oryCun1|scaffold_127977 (12332-11912) |
|
230-781, gnl|panTro1|chr1 (43519243-43519663) |
|
230-781, gnl|rheMac2|chr1 (45309435-45309855) |
|
230-781, gnl|rn3|chr5 (140067732-140067312) |
|
230-781, gnl|tetNig1|chr9 (1790498-1790940) |
|
230-781, gnl|xenTro1|scaffold_225 (985393-984977) |
