Non-Coding RNA Search

Liv1-LVR010021B08

Sequence:


               
               AGTGTCATGAGTATTTCAGTCATCATTCAAAAAGAATTTAAGAAAAACCATTCTTTGGAA
AGGAAATTAATATAGGGGTATCGCAGTATAATATTATTAAAATGTGGATTTTTTTAAACT
GAATGTGTTCAATTTAATGACCACCTGTTAGATAGATGAAATGGAAAGCGAGGGATGGGA
ATGTTACAAAATAAAATGCTAGATTTTAATAATCTTTTGTATTATAGAGTTTTTAGTAGA
AAACTGTTCTTTGTGTTTTTTTTTTTTTTTGTTTTTTTTTAAGGCAGGAAGATTCTCAAT
GCTTATTGGCTGGAATATATACAAAGCAAAACTGAAAATATGAATTCAGTATTTAGTTGA
TGAGTGGTTAATAAAAGGTGTCTGTCATTTGTATGTTCCAAAATTAAGCAGAGTATTGTT
AAAGCTTTGGGGGTAGAGAGGGGCCAAGAGGCATTTATAGCATTATTTCTACTGGATGGA
TTTGTTAACATTTGTTGATATTTAAATGCAGTATGTTAATAGGTAAATACTTTATGTTCA
TCTCGTAATGGTGTTTCATCTTTCACTCTTTACTCATGTTAATATTTAGTATTTCCTTCA
GCAGTTCTAAATTGTTCTTAAATTTGCCACGTATACTGTTTTTTCTCACCTCCACACCTT
TGCTCAATAAGGAATGCACTCCACTTATCTGTGCTTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTGTCATGAGTATTTCAGTCATCATTCAAAAAGAATTTAAGAAAAACCATTCTTTGGAA
AGGAAATTAATATAGGGGTATCGCAGTATAATATTATTAAAATGTGGATTTTTTTAAACT
GAATGTGTTCAATTTAATGACCACCTGTTAGATAGATGAAATGGAAAGCGAGGGATGGGA
ATGTTACAAAATAAAATGCTAGATTTTAATAATCTTTTGTATTATAGAGTTTTTAGTAGA
AAACTGTTCTTTGTGTTTTTTTTTTTTTTTGTTTTTTTTTAAGGCAGGAAGATTCTCAAT
GCTTATTGGCTGGAATATATACAAAGCAAAACTGAAAATATGAATTCAGTATTTAGTTGA
TGAGTGGTTAATAAAAGGTGTCTGTCATTTGTATGTTCCAAAATTAAGCAGAGTATTGTT
AAAGCTTTGGGGGTAGAGAGGGGCCAAGAGGCATTTATAGCATTATTTCTACTGGATGGA
TTTGTTAACATTTGTTGATATTTAAATGCAGTATGTTAATAGGTAAATACTTTATGTTCA
TCTCGTAATGGTGTTTCATCTTTCACTCTTTACTCATGTTAATATTTAGTATTTCCTTCA
GCAGTTCTAAATTGTTCTTAAATTTGCCACGTATACTGTTTTTTCTCACCTCCACACCTT
TGCTCAATAAGGAATGCACTCCACTTATCTGTGCTTGCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               300-418, - strand, RNAz p=0.554854

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               300-418, - strand, RNAz p=0.554854

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-691, gnl|bosTau2|chr2 (31633720-31633034)
               

               
               1-691, gnl|Hg17|chr2 (148656818-148658149)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-691, gnl|bosTau2|chr2 (31633720-31633034)
               

               
               1-691, gnl|Hg17|chr2 (148656818-148658149)

	1-691, gnl\|bosTau2\|chr2 (31633720-31633034)
	1-691, gnl\|Hg17\|chr2 (148656818-148658149)