Non-Coding RNA Search

Liv1-LVR010038F05

Sequence:


               
               TGTCATAGACCTCTTTGGAGCTGGGTTTGACACAGTCACAACCGCCATCTCCTGGAGCCT
CATGTACCTGGTGACAAATCCCAGCATCCAGAGAAAGATCCAGGAGGAGCTGGACACGGT
GATCGGCCAGGCGCGGCGGCCCCGGCTCTCCGACAGACCCCAGCTGCCCTATATGGAGGC
CTTCATCCTGGAGCTCTTCCGACACACCTCCTTCGTTCCCTTCACCATCCCTCACAGTAC
CACAAGAGACACAAGTCTGAATGGCTTTTACATCCCCAAGGGGCGTTGTGTCTTTGTGAA
CCAGTGGCAGATCAACCATGACCAGAAGCTGTGGGATGACCCCTCTGTGTTCCGGCCAGA
ACGGTTTCTCACTGCCGATGGCACCATCAACAAGGCACTGGGTGAAAAGGTGATCCTGTT
CGGCTTGGGCAAGCGGAAGTGCATCGGTGAAACCATTGCCCGCTTGGAGGTCTTTCTCTT
CCTGGCCATCCTGCTGCAGCAGGTGGAGTTCCGCGTGACCCCTGGTGTGAAGGTGGACAT
GACCCCCATCTACGGGCTGACCATGAAGCATGCCCACTGCGAGCATGTCCAGATGCATGT
GCGCTCTTAGGCGGTGGAGAGCCCTGCAACCTAGACTTTCTCCTGCCTGTCTGGGCAGCC
AGGCCAGGGGACTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTCATAGACCTCTTTGGAGCTGGGTTTGACACAGTCACAACCGCCATCTCCTGGAGCCT
CATGTACCTGGTGACAAATCCCAGCATCCAGAGAAAGATCCAGGAGGAGCTGGACACGGT
GATCGGCCAGGCGCGGCGGCCCCGGCTCTCCGACAGACCCCAGCTGCCCTATATGGAGGC
CTTCATCCTGGAGCTCTTCCGACACACCTCCTTCGTTCCCTTCACCATCCCTCACAGTAC
CACAAGAGACACAAGTCTGAATGGCTTTTACATCCCCAAGGGGCGTTGTGTCTTTGTGAA
CCAGTGGCAGATCAACCATGACCAGAAGCTGTGGGATGACCCCTCTGTGTTCCGGCCAGA
ACGGTTTCTCACTGCCGATGGCACCATCAACAAGGCACTGGGTGAAAAGGTGATCCTGTT
CGGCTTGGGCAAGCGGAAGTGCATCGGTGAAACCATTGCCCGCTTGGAGGTCTTTCTCTT
CCTGGCCATCCTGCTGCAGCAGGTGGAGTTCCGCGTGACCCCTGGTGTGAAGGTGGACAT
GACCCCCATCTACGGGCTGACCATGAAGCATGCCCACTGCGAGCATGTCCAGATGCATGT
GCGCTCTTAGGCGGTGGAGAGCCCTGCAACCTAGACTTTCTCCTGCCTGTCTGGGCAGCC
AGGCCAGGGGACTGA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|18693259|gb|AAL78302.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|18693259|gb|AAL78302.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               113-237, gnl|bosTau2|chr21 (22911565-22911441)
               

               
               113-237, gnl|Hg17|chr15 (72800717-72800593)
               

               
               113-237, gnl|Mm7|chr9 (57729737-57729861)
               


               
               318-636, gnl|bosTau2|chr21 (22911053-22910735)
               

               
               318-636, gnl|Hg17|chr15 (72800175-72799858)
               

               
               318-636, gnl|Mm7|chr9 (57730229-57730547)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               113-237, gnl|bosTau2|chr21 (22911565-22911441)
               

               
               113-237, gnl|Hg17|chr15 (72800717-72800593)
               

               
               113-237, gnl|Mm7|chr9 (57729737-57729861)
               


               
               318-636, gnl|bosTau2|chr21 (22911053-22910735)
               

               
               318-636, gnl|Hg17|chr15 (72800175-72799858)
               

               
               318-636, gnl|Mm7|chr9 (57730229-57730547)

	113-237, gnl\|bosTau2\|chr21 (22911565-22911441)
	113-237, gnl\|Hg17\|chr15 (72800717-72800593)
	113-237, gnl\|Mm7\|chr9 (57729737-57729861)

	318-636, gnl\|bosTau2\|chr21 (22911053-22910735)
	318-636, gnl\|Hg17\|chr15 (72800175-72799858)
	318-636, gnl\|Mm7\|chr9 (57730229-57730547)