Non-Coding RNA Search

Liv1-LVR010042E05

Sequence:


               
               ACTTCACCCTCCAACATTCTTAGTGAGAAAGGGTCCTCACTCTTATCCCTAAATTATCGG
GTAGCACTCAGAGGGGCTGTCTGCAACCCAGCACTTTCTGGTCCAGCGAGCAGATGTGGG
TGCACCCAGCAGTCACGTGGCCTCCGGCCGCGTCTCGCGCTTTCCCTGTAATGAAATCCA
GTTCGGTCTTTGCCAAAAGGCCCCACTCTCAGCTCTGGAGAGCCCAAACCACCTTTCCGC
ACAGTGGTGTTTTCCTGCTGAAACTGTTAAAATATTCTTTGTGTTTTGATCAGAATGTGA
AAAAGACGGACTGGTTCCAGGAATGGCCAGATGCCTATGAGAAGCACATCTACAGCTCGG
AGGACCGGAGCGCACAGCGGCACCTGAGCAGCTGGGCCATGCGCAACACCAACAACCACA
ACTCCCGCATCCTCAAGAAGTCCTGTCTGGGCGTGGTGGTGTGCGGCCGCGATTGCTTGG
CCCCTGAGGGCCGCAAGGTCTACCTGAGGCCCGCCATCTGCGACAAAGCCCGGCAGAAGC
AGCAGAGGAAACGCTGTCCCAACTGTGATGGCCCCTTGAAGCTCATTCCCTGCCGTGGCC
ACGGGGGCTTTCCCGTCACTAACTTCTGGAGGCACGACGGCCGCTTCATATTCTTCCAGG
TTGAATCTGAGTTAAAGATTCCTTTTCTCTTGAATTCTGAACTGTGCACAGAGCATGAGG
AGGCTCGTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTCACCCTCCAACATTCTTAGTGAGAAAGGGTCCTCACTCTTATCCCTAAATTATCGG
GTAGCACTCAGAGGGGCTGTCTGCAACCCAGCACTTTCTGGTCCAGCGAGCAGATGTGGG
TGCACCCAGCAGTCACGTGGCCTCCGGCCGCGTCTCGCGCTTTCCCTGTAATGAAATCCA
GTTCGGTCTTTGCCAAAAGGCCCCACTCTCAGCTCTGGAGAGCCCAAACCACCTTTCCGC
ACAGTGGTGTTTTCCTGCTGAAACTGTTAAAATATTCTTTGTGTTTTGATCAGAATGTGA
AAAAGACGGACTGGTTCCAGGAATGGCCAGATGCCTATGAGAAGCACATCTACAGCTCGG
AGGACCGGAGCGCACAGCGGCACCTGAGCAGCTGGGCCATGCGCAACACCAACAACCACA
ACTCCCGCATCCTCAAGAAGTCCTGTCTGGGCGTGGTGGTGTGCGGCCGCGATTGCTTGG
CCCCTGAGGGCCGCAAGGTCTACCTGAGGCCCGCCATCTGCGACAAAGCCCGGCAGAAGC
AGCAGAGGAAACGCTGTCCCAACTGTGATGGCCCCTTGAAGCTCATTCCCTGCCGTGGCC
ACGGGGGCTTTCCCGTCACTAACTTCTGGAGGCACGACGGCCGCTTCATATTCTTCCAGG
TTGAATCTGAGTTAAAGATTCCTTTTCTCTTGAATTCTGAACTGTGCACAGAGCATGAGG
AGGCTCGTCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q6PML8_PIG

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q6PML8_PIG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               487-584, - strand, RNAz p=0.920181

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               487-584, - strand, RNAz p=0.920181

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-584, gnl|bosTau2|chr23 (22576067-22576653)
               

               
               2-584, gnl|Hg17|chr6 (53107405-53106754)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-584, gnl|bosTau2|chr23 (22576067-22576653)
               

               
               2-584, gnl|Hg17|chr6 (53107405-53106754)

	2-584, gnl\|bosTau2\|chr23 (22576067-22576653)
	2-584, gnl\|Hg17\|chr6 (53107405-53106754)