Liv1-LVR010060D02
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGGGAGCTACACTCTGGCTCCTCGGCTTGTGGCTGTGGGTCCGACCCGGCCCGCCCTCC GTACTGCGCTTCGGGACCCCCGTCGCCCCTGTGTCCTTCTGCCCGCCAGGCTGGGGCCAC AGACCCCCAGTCGCCTCTCTCCGGTCTCCGGCAGCTCCTGCGCCTCCAGCTCCTAAGACA AGATGCCGTCGGGCTTCCAACAGATCGGCTCCGAAGATGGGGAGCCCCCTCAGCAGCGAG TCACTGGGACCCTTGTCCTCGCCGTCTTCTCCGCTGTGCTCGGCTCCCTGCAGTTTGGCT ACAACATTGGGGTCATCAATGCCCCCCAGAAGGTGATTGAACAGAGCTACAATGAGACGT GGCTGGGCAGGCAAGGGCCCAATGGACCCGGCTCCATCCCACCAGGCACCCTCACTACCC TCTGGGCTCTCTCCGTGGCCATCTTCTCTGTGGGTGGCATGTTCTCTTCCTTCCTGCTTG GCATCGTCTCTCAGTGGCTGGGAAGGAAGAAGGCAATGCTGTTCAATAACACCCTGGCAG TGCTGGCGGGTGCCCTCATGGGGCTGGCCAAGGCGGCTGCCTCCTACGAGATGCTCATTC TTGGACGGTTCCTCATTGGTGCCTACTCAGGGCTGGCATCTGGGCTGGTGCCCATGTACG TGGGGGAGATCGCCCCCACTCACCTGCGGGGTGCCTTGGGGACACTCAACCAGCTGGCCA TCGTCATTGGCATTCTGATCGCTCAGGTGCTGGGCTTGGAGTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGGGAGCTACACTCTGGCTCCTCGGCTTGTGGCTGTGGGTCCGACCCGGCCCGCCCTCC GTACTGCGCTTCGGGACCCCCGTCGCCCCTGTGTCCTTCTGCCCGCCAGGCTGGGGCCAC AGACCCCCAGTCGCCTCTCTCCGGTCTCCGGCAGCTCCTGCGCCTCCAGCTCCTAAGACA AGATGCCGTCGGGCTTCCAACAGATCGGCTCCGAAGATGGGGAGCCCCCTCAGCAGCGAG TCACTGGGACCCTTGTCCTCGCCGTCTTCTCCGCTGTGCTCGGCTCCCTGCAGTTTGGCT ACAACATTGGGGTCATCAATGCCCCCCAGAAGGTGATTGAACAGAGCTACAATGAGACGT GGCTGGGCAGGCAAGGGCCCAATGGACCCGGCTCCATCCCACCAGGCACCCTCACTACCC TCTGGGCTCTCTCCGTGGCCATCTTCTCTGTGGGTGGCATGTTCTCTTCCTTCCTGCTTG GCATCGTCTCTCAGTGGCTGGGAAGGAAGAAGGCAATGCTGTTCAATAACACCCTGGCAG TGCTGGCGGGTGCCCTCATGGGGCTGGCCAAGGCGGCTGCCTCCTACGAGATGCTCATTC TTGGACGGTTCCTCATTGGTGCCTACTCAGGGCTGGCATCTGGGCTGGTGCCCATGTACG TGGGGGAGATCGCCCCCACTCACCTGCGGGGTGCCTTGGGGACACTCAACCAGCTGGCCA TCGTCATTGGCATTCTGATCGCTCAGGTGCTGGGCTTGGAGTCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 583-748, + strand, RNAz p=0.908449 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 583-748, + strand, RNAz p=0.908449 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 3-221, gnl|bosTau2|chr19 (20526392-20526610) | |
| 3-221, gnl|Hg17|chr17 (7125795-7126016) | |
| 3-221, gnl|Mm7|chr11 (70029727-70029517) | |
| 504-748, gnl|bosTau2|chr11 (43026386-43026142) | |
| 504-748, gnl|canFam2|chr15 (3488167-3487915) | |
| 504-748, gnl|danRer3|chr16 (38272963-38272712) | |
| 504-748, gnl|dasNov1|scaffold_99177 (5480-5229) | |
| 504-748, gnl|echTel1|scaffold_293251 (3612-3361) | |
| 504-748, gnl|fr1|chrUn (275221962-275222213) | |
| 504-748, gnl|galGal2|chr21 (6174433-6174682) | |
| 504-748, gnl|hg17|chr1 (43065389-43065640) | |
| 504-748, gnl|Hg17|chr1 (43065632-43065388) | |
| 504-748, gnl|loxAfr1|scaffold_54108 (4325-4080) | |
| 504-748, gnl|mm7|chr4 (118509125-118508875) | |
| 504-748, gnl|Mm7|chr4 (118508880-118509124) | |
| 504-748, gnl|monDom2|scaffold_43 (3791702-3791435) | |
| 504-748, gnl|oryCun1|scaffold_162705 (190-440) | |
| 504-748, gnl|panTro1|chr1 (44041177-44041428) | |
| 504-748, gnl|rheMac2|chr1 (45827157-45827409) | |
| 504-748, gnl|rn3|chr5 (139719437-139719187) | |
| 504-748, gnl|tetNig1|chr11 (8033861-8034109) | |
| 504-748, gnl|xenTro1|scaffold_5428 (6484-6743) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-221, gnl|bosTau2|chr19 (20526392-20526610) | |
| 3-221, gnl|Hg17|chr17 (7125795-7126016) | |
| 3-221, gnl|Mm7|chr11 (70029727-70029517) | |
| 504-748, gnl|bosTau2|chr11 (43026386-43026142) | |
| 504-748, gnl|canFam2|chr15 (3488167-3487915) | |
| 504-748, gnl|danRer3|chr16 (38272963-38272712) | |
| 504-748, gnl|dasNov1|scaffold_99177 (5480-5229) | |
| 504-748, gnl|echTel1|scaffold_293251 (3612-3361) | |
| 504-748, gnl|fr1|chrUn (275221962-275222213) | |
| 504-748, gnl|galGal2|chr21 (6174433-6174682) | |
| 504-748, gnl|hg17|chr1 (43065389-43065640) | |
| 504-748, gnl|Hg17|chr1 (43065632-43065388) | |
| 504-748, gnl|loxAfr1|scaffold_54108 (4325-4080) | |
| 504-748, gnl|mm7|chr4 (118509125-118508875) | |
| 504-748, gnl|Mm7|chr4 (118508880-118509124) | |
| 504-748, gnl|monDom2|scaffold_43 (3791702-3791435) | |
| 504-748, gnl|oryCun1|scaffold_162705 (190-440) | |
| 504-748, gnl|panTro1|chr1 (44041177-44041428) | |
| 504-748, gnl|rheMac2|chr1 (45827157-45827409) | |
| 504-748, gnl|rn3|chr5 (139719437-139719187) | |
| 504-748, gnl|tetNig1|chr11 (8033861-8034109) | |
| 504-748, gnl|xenTro1|scaffold_5428 (6484-6743) |