Non-Coding RNA Search

Liv1-LVR010060F01

Sequence:


               
               TTTTAGACATTACTTTTTTTTTTTTTTTTTTTTTGGTCTACTGGCAGTTGTCTTCAGCTA
CAGCCGTGGAAAGTGGAATAGTGAAGCCAAGGGTGGGCACAGCCAGGAGACTCTACGGTG
TCAagggtttctcagcctcagtgctgtggacatttggggctggatagttcttggttgtgg
ggctgtcctgtatattgtgggatgggtagcagcatctctgggttctgcccatcggatgcc
aggagcaacccccacctccagttgGGATGATGGCCAACCTTACCAGATGTTCCCTGGGTG
GGAGGGGGATTGTCTCAAGTTGAGAGCACTGCTCAGAAAACACGGCCTTTCCCTGGTCCC
TGCATTCAGGTTTTCTCCGGGGGTCAGCTGTTCCCCCAGACCACTGGTCTGTGTCCTCTG
TGCCTACTTGCGTTGCCTCTGCCTGTCCCCATCCCTGCAGGGACACCCCCCTCCCCCACC
ACACCATTTTCATCCTGAAGAAGATGAAATGCTTTCCACCCTCTCTTATCCCCCACAACA
TGTAGTAAGTTTAATGCACACTGTTCTTGTCATGAAATGTTTGCATTGTATTTACCAAAT
ATATGTTCTTTAAGTTTGCCAAATGTGCAGCTTCAGCCAGAGAAAACACATTTCCACACA
GTGTTTCCGTTTGGTTTTATTTACGGGTGTTTTTTTTTTACTTGTCAGTGCCAAGAGGAC
ATATTTGTCCTGAGGTCTCTGTGGTTCTGGGTTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTAGACATTACTTTTTTTTTTTTTTTTTTTTTGGTCTACTGGCAGTTGTCTTCAGCTA
CAGCCGTGGAAAGTGGAATAGTGAAGCCAAGGGTGGGCACAGCCAGGAGACTCTACGGTG
TCAagggtttctcagcctcagtgctgtggacatttggggctggatagttcttggttgtgg
ggctgtcctgtatattgtgggatgggtagcagcatctctgggttctgcccatcggatgcc
aggagcaacccccacctccagttgGGATGATGGCCAACCTTACCAGATGTTCCCTGGGTG
GGAGGGGGATTGTCTCAAGTTGAGAGCACTGCTCAGAAAACACGGCCTTTCCCTGGTCCC
TGCATTCAGGTTTTCTCCGGGGGTCAGCTGTTCCCCCAGACCACTGGTCTGTGTCCTCTG
TGCCTACTTGCGTTGCCTCTGCCTGTCCCCATCCCTGCAGGGACACCCCCCTCCCCCACC
ACACCATTTTCATCCTGAAGAAGATGAAATGCTTTCCACCCTCTCTTATCCCCCACAACA
TGTAGTAAGTTTAATGCACACTGTTCTTGTCATGAAATGTTTGCATTGTATTTACCAAAT
ATATGTTCTTTAAGTTTGCCAAATGTGCAGCTTCAGCCAGAGAAAACACATTTCCACACA
GTGTTTCCGTTTGGTTTTATTTACGGGTGTTTTTTTTTTACTTGTCAGTGCCAAGAGGAC
ATATTTGTCCTGAGGTCTCTGTGGTTCTGGGTTTTTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               406-690, - strand, RNAz p=0.890131

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               406-690, - strand, RNAz p=0.890131

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               117-690, gnl|bosTau2|chr4 (32536706-32536151)
               

               
               117-690, gnl|Hg17|chr7 (36738009-36737381)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               117-690, gnl|bosTau2|chr4 (32536706-32536151)
               

               
               117-690, gnl|Hg17|chr7 (36738009-36737381)

	117-690, gnl\|bosTau2\|chr4 (32536706-32536151)
	117-690, gnl\|Hg17\|chr7 (36738009-36737381)