Liv1-LVR010068C12
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATATAAATTTTTCCTAACTCTTAAAAAATAAATTCAGCCCCAACTCCTGGTCCAGAGTTT AGCATCCTCCTGCTTCTGAGATCAGAGAAGCAGGCCATATGGAGAGGATGCTAATCCTAT TCTCTGTTTATTGACACAGAAAAAATATGCAGACTGAACAGATTTGTGCTCTCGTGTCCA GAGATCTTGGGTGATTGCAGATCTCAACACTCCCTTTAAATGGATGGAGGCAAGTATCCC GGGACCCTGGCTATCAGCTGCCAATTCTGTTGCCTAAGGTGATATTATGTTAACATATGG TGGCTGCGTGTGAGAGGAGGGTGAGCTTGCTATACCATCTCCTGTCTGTGTGGGAGGGGG GTGTGCTGCTCTCTCTCTCTCTTAATCTCAGGTTCACAGTCCCTGAAGGTAACTATTTAT TCCAAGATTATTTATTAAGGTCCTATAATATGAGGAGGGCTCTACCCCACGCTGTGAGCA CTAAGACTGAGCTACTACGTGTCTCGGTCAAAAATGGAGCGTCCAACCGAGGGTGAGCAA TAAGACACGTGACTCAATAGCGATCATTCAACCCAATTATGATAAATCCTATCATAGCGG TTTTCTCACCAGGCCATGGCTGTTGAGAGGAGGAAGTCTTCACTTCCTGCCAGGAACATC AGGAAAGGGTTATTTGGCAGAGAGGGGGGCATTTGTCCTCAACCTTAAGGTTCTTCGTTC CTTAGCTTGGGTCCTGTCTGGCTTGTTTCCTAGTTTTCCCCCAGATCCAGTCCAGCCACT GATAGGCTATGAATACACCAGTGTTTGAGAATTAATTAATAAAAGACGGAAAAGAAAGAC ACACCCCAAGGGACATGGCCTGAACACAGACATGCAGGCAGATGTTTAAGCATGTCTGAN GAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATATAAATTTTTCCTAACTCTTAAAAAATAAATTCAGCCCCAACTCCTGGTCCAGAGTTT AGCATCCTCCTGCTTCTGAGATCAGAGAAGCAGGCCATATGGAGAGGATGCTAATCCTAT TCTCTGTTTATTGACACAGAAAAAATATGCAGACTGAACAGATTTGTGCTCTCGTGTCCA GAGATCTTGGGTGATTGCAGATCTCAACACTCCCTTTAAATGGATGGAGGCAAGTATCCC GGGACCCTGGCTATCAGCTGCCAATTCTGTTGCCTAAGGTGATATTATGTTAACATATGG TGGCTGCGTGTGAGAGGAGGGTGAGCTTGCTATACCATCTCCTGTCTGTGTGGGAGGGGG GTGTGCTGCTCTCTCTCTCTCTTAATCTCAGGTTCACAGTCCCTGAAGGTAACTATTTAT TCCAAGATTATTTATTAAGGTCCTATAATATGAGGAGGGCTCTACCCCACGCTGTGAGCA CTAAGACTGAGCTACTACGTGTCTCGGTCAAAAATGGAGCGTCCAACCGAGGGTGAGCAA TAAGACACGTGACTCAATAGCGATCATTCAACCCAATTATGATAAATCCTATCATAGCGG TTTTCTCACCAGGCCATGGCTGTTGAGAGGAGGAAGTCTTCACTTCCTGCCAGGAACATC AGGAAAGGGTTATTTGGCAGAGAGGGGGGCATTTGTCCTCAACCTTAAGGTTCTTCGTTC CTTAGCTTGGGTCCTGTCTGGCTTGTTTCCTAGTTTTCCCCCAGATCCAGTCCAGCCACT GATAGGCTATGAATACACCAGTGTTTGAGAATTAATTAATAAAAGACGGAAAAGAAAGAC ACACCCCAAGGGACATGGCCTGAACACAGACATGCAGGCAGATGTTTAAGCATGTCTGAN GAAC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 2-159, - strand, RNAz p=0.959368 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 2-159, - strand, RNAz p=0.959368 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 2-547, gnl|bosTau2|chr4 (2618249-2617709) | |
| 2-547, gnl|canFam2|chr32 (15503135-15503939) | |
| 2-547, gnl|dasNov1|scaffold_2343 (122817-123589) | |
| 2-547, gnl|echTel1|scaffold_185575 (749-1569) | |
| 2-547, gnl|hg17|chr4 (90568848-90569666) | |
| 2-547, gnl|Hg17|chr4 (90569538-90568969) | |
| 2-547, gnl|loxAfr1|scaffold_12325 (21524-22342) | |
| 2-547, gnl|mm7|chr6 (59377893-59378548) | |
| 2-547, gnl|oryCun1|scaffold_212486 (60053-59154) | |
| 2-547, gnl|panTro1|chr3 (106563935-106564752) | |
| 2-547, gnl|rheMac2|chr5 (82233146-82233974) | |
| 2-547, gnl|rn3|chr4 (88691094-88691739) | |
| 579-890, gnl|bosTau2|chr4 (2617709-2617377) | |
| 579-890, gnl|canFam2|chr32 (15502720-15502912) | |
| 579-890, gnl|dasNov1|scaffold_2343 (122565-122816) | |
| 579-890, gnl|echTel1|scaffold_185575 (415-748) | |
| 579-890, gnl|hg17|chr4 (90568589-90568847) | |
| 579-890, gnl|Hg17|chr4 (90568969-90568623) | |
| 579-890, gnl|loxAfr1|scaffold_12325 (21184-21523) | |
| 579-890, gnl|mm7|chr6 (59377673-59377892) | |
| 579-890, gnl|Mm7|chr6 (59377998-59377683) | |
| 579-890, gnl|oryCun1|scaffold_212486 (60289-60054) | |
| 579-890, gnl|panTro1|chr3 (106563676-106563934) | |
| 579-890, gnl|rheMac2|chr5 (82232887-82233145) | |
| 579-890, gnl|rn3|chr4 (88690871-88691093) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-547, gnl|bosTau2|chr4 (2618249-2617709) | |
| 2-547, gnl|canFam2|chr32 (15503135-15503939) | |
| 2-547, gnl|dasNov1|scaffold_2343 (122817-123589) | |
| 2-547, gnl|echTel1|scaffold_185575 (749-1569) | |
| 2-547, gnl|hg17|chr4 (90568848-90569666) | |
| 2-547, gnl|Hg17|chr4 (90569538-90568969) | |
| 2-547, gnl|loxAfr1|scaffold_12325 (21524-22342) | |
| 2-547, gnl|mm7|chr6 (59377893-59378548) | |
| 2-547, gnl|oryCun1|scaffold_212486 (60053-59154) | |
| 2-547, gnl|panTro1|chr3 (106563935-106564752) | |
| 2-547, gnl|rheMac2|chr5 (82233146-82233974) | |
| 2-547, gnl|rn3|chr4 (88691094-88691739) | |
| 579-890, gnl|bosTau2|chr4 (2617709-2617377) | |
| 579-890, gnl|canFam2|chr32 (15502720-15502912) | |
| 579-890, gnl|dasNov1|scaffold_2343 (122565-122816) | |
| 579-890, gnl|echTel1|scaffold_185575 (415-748) | |
| 579-890, gnl|hg17|chr4 (90568589-90568847) | |
| 579-890, gnl|Hg17|chr4 (90568969-90568623) | |
| 579-890, gnl|loxAfr1|scaffold_12325 (21184-21523) | |
| 579-890, gnl|mm7|chr6 (59377673-59377892) | |
| 579-890, gnl|Mm7|chr6 (59377998-59377683) | |
| 579-890, gnl|oryCun1|scaffold_212486 (60289-60054) | |
| 579-890, gnl|panTro1|chr3 (106563676-106563934) | |
| 579-890, gnl|rheMac2|chr5 (82232887-82233145) | |
| 579-890, gnl|rn3|chr4 (88690871-88691093) |