Non-Coding RNA Search

Liv1-LVR010106D05

Sequence:


               
               ATAGACATTAACAGACAAGCGAAATTTGCCGCCACCCCTTCTCTGGCCTTGTTTGTCAAC
CTCAAAAATGTGGTTTGTAAAATCGGAGAAGAAGCCGAAGTGCTCATGTCGCTCTATGAC
CCCGTGGACTCCAAATTCCTCAGTGAAAACTACCTGGTTCGCTGGTCAAGTTCAGGACTG
CCTAAGGATATAGACAGATTACATAATTTGCGAGCTGTTTTCACTGACCTCGGAAGCAAA
GACCTGAAAAGGGAGAAAATCAGTTTCGTGCGTCAGATCGTCCGCGTGGGTCGCATGGAG
CTGAGGGACAACCACACCAGGAAGCTGACGTCAGGCCTGCGGCGGCCTCTCGGGGTGGCC
GGTAATCCGTTTCCCTCCCTTCAGCCTTTCGGGGTCCTCGCATTCGCTGTGAACACGAGC
TGATGTCCCCCTTGGACAGGGGGCCGCTTGACTCATAAGCTTTTCAGCAAGAGAGAAAAA
AAAAATCTGAGTTCTTCTCTGTGCGGGTTCAAGGTGACAGCCAGCTCAGGAGCCGTGAGC
TCCAGCGGGAACTCCAGTTTTGTTTCCCTGTGAACCCTTTGAAATGCATTTGGCTTTTAG
AGCCATTTTAGGTTCAAAGCAAAATTGAGCTGTGGGGCGAGGGCAGAGGGGTCGAGGGGG
CAGTGATCTCTGATCCCCCTGTGTTGATCCCAGAGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAGACATTAACAGACAAGCGAAATTTGCCGCCACCCCTTCTCTGGCCTTGTTTGTCAAC
CTCAAAAATGTGGTTTGTAAAATCGGAGAAGAAGCCGAAGTGCTCATGTCGCTCTATGAC
CCCGTGGACTCCAAATTCCTCAGTGAAAACTACCTGGTTCGCTGGTCAAGTTCAGGACTG
CCTAAGGATATAGACAGATTACATAATTTGCGAGCTGTTTTCACTGACCTCGGAAGCAAA
GACCTGAAAAGGGAGAAAATCAGTTTCGTGCGTCAGATCGTCCGCGTGGGTCGCATGGAG
CTGAGGGACAACCACACCAGGAAGCTGACGTCAGGCCTGCGGCGGCCTCTCGGGGTGGCC
GGTAATCCGTTTCCCTCCCTTCAGCCTTTCGGGGTCCTCGCATTCGCTGTGAACACGAGC
TGATGTCCCCCTTGGACAGGGGGCCGCTTGACTCATAAGCTTTTCAGCAAGAGAGAAAAA
AAAAATCTGAGTTCTTCTCTGTGCGGGTTCAAGGTGACAGCCAGCTCAGGAGCCGTGAGC
TCCAGCGGGAACTCCAGTTTTGTTTCCCTGTGAACCCTTTGAAATGCATTTGGCTTTTAG
AGCCATTTTAGGTTCAAAGCAAAATTGAGCTGTGGGGCGAGGGCAGAGGGGTCGAGGGGG
CAGTGATCTCTGATCCCCCTGTGTTGATCCCAGAGCG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61821731|ref|XP_617359.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61821731|ref|XP_617359.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-143, gnl|bosTau2|chr26 (32504340-32504198)
               

               
               1-143, gnl|Hg17|chr10 (128686361-128686503)
               

               
               1-143, gnl|Mm7|chr7 (131149859-131150001)
               


               
               219-546, gnl|bosTau2|chr26 (32502332-32502003)
               

               
               219-546, gnl|Hg17|chr10 (128688419-128688761)
               

               
               219-546, gnl|Mm7|chr7 (131151795-131152098)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-143, gnl|bosTau2|chr26 (32504340-32504198)
               

               
               1-143, gnl|Hg17|chr10 (128686361-128686503)
               

               
               1-143, gnl|Mm7|chr7 (131149859-131150001)
               


               
               219-546, gnl|bosTau2|chr26 (32502332-32502003)
               

               
               219-546, gnl|Hg17|chr10 (128688419-128688761)
               

               
               219-546, gnl|Mm7|chr7 (131151795-131152098)

	1-143, gnl\|bosTau2\|chr26 (32504340-32504198)
	1-143, gnl\|Hg17\|chr10 (128686361-128686503)
	1-143, gnl\|Mm7\|chr7 (131149859-131150001)

	219-546, gnl\|bosTau2\|chr26 (32502332-32502003)
	219-546, gnl\|Hg17\|chr10 (128688419-128688761)
	219-546, gnl\|Mm7\|chr7 (131151795-131152098)