Liv1-LVRM10002D06
|
ACTTGAAAGACCAGGGTGCCAGAAATCTCCATGATTACGTTACTGGAGCGAGGTTCTTTT
TTTGTGGTTTGTGCAGCTGAGCGTCAGGGCCACAGGATTCTCCGGCTCTTTCTCACTCTT
ATTTTTTCCAGGTCAGAACCAGAGCTTGGGGTGGGGAGGAAAATCCTGCTGAATGAGCAA
GTTCTTTCTTAAAAAGCTCTCTCCAAGTCCAAAAAGGCTTCAGTGGACTTAGGAGAAAGA
AACTTAATCCATTGCCATAGAATCATTGTGAAGCAGGCGAAAGCCAAGTCCACAGCATCT
TTGTCTTATAAAAGAAAGCAGAGAGGAGATGGAAAAAAAGAAATGATGCTTAGGAAATCC
AAAGCAAACAACGAAAAAACTAAAGGAGAAAAACGAAAGATCACCTCAGAGAATGGGAAG
ATTTCCTTCTAATAAGATTTTTCAATTACAAAACCAAGGCTCCGGTAGAAGTGGCTTTTC
GGTGCTCTTTAAGCAAATGGCATACCTGAAACATCTGACCTAGGATGGGGTTTGCCACTT
TGGGCTTAAGGAAGAGTTGGCCACCGTGCAGGACCGGGACTGCGAGGGGAAGAGGCGACC
GTGGAGAGGCTGGAGGCCTCCTAGCCTGGTCCTTGACCTGCGTCTGAACCTTGGTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACTTGAAAGACCAGGGTGCCAGAAATCTCCATGATTACGTTACTGGAGCGAGGTTCTTTT
TTTGTGGTTTGTGCAGCTGAGCGTCAGGGCCACAGGATTCTCCGGCTCTTTCTCACTCTT
ATTTTTTCCAGGTCAGAACCAGAGCTTGGGGTGGGGAGGAAAATCCTGCTGAATGAGCAA
GTTCTTTCTTAAAAAGCTCTCTCCAAGTCCAAAAAGGCTTCAGTGGACTTAGGAGAAAGA
AACTTAATCCATTGCCATAGAATCATTGTGAAGCAGGCGAAAGCCAAGTCCACAGCATCT
TTGTCTTATAAAAGAAAGCAGAGAGGAGATGGAAAAAAAGAAATGATGCTTAGGAAATCC
AAAGCAAACAACGAAAAAACTAAAGGAGAAAAACGAAAGATCACCTCAGAGAATGGGAAG
ATTTCCTTCTAATAAGATTTTTCAATTACAAAACCAAGGCTCCGGTAGAAGTGGCTTTTC
GGTGCTCTTTAAGCAAATGGCATACCTGAAACATCTGACCTAGGATGGGGTTTGCCACTT
TGGGCTTAAGGAAGAGTTGGCCACCGTGCAGGACCGGGACTGCGAGGGGAAGAGGCGACC
GTGGAGAGGCTGGAGGCCTCCTAGCCTGGTCCTTGACCTGCGTCTGAACCTTGGTC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
173-258, + strand, RNAmicro p=0.965927 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
173-258, + strand, RNAmicro p=0.965927 |
|
121-320, BP139098 full-length enriched swine cDNA library, adult liver Sus
(dbj|BP139098.1|), blast E-value=0, identity=100% |
PigEST conread start position and end position of sequence similarity to another annotated EST (NCBI dbEST),
transcript identifier and annotation,
blast E-value,
PigEST conread identity to the similar transcript
|
121-320, BP139098 full-length enriched swine cDNA library, adult liver Sus
(dbj|BP139098.1|), blast E-value=0, identity=100% |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
