Non-Coding RNA Search

Liv1-LVRM10027H05

Sequence:


               
               AACACTCAAATGCAGCGGGGTATCTTGCCGGCAGCGGGCGCTGTGGATTACTTTTGACAA
CCACAGAGACCTGATGGAAGTGGTATGGAATGTGGGAGCTGCCCTGTGGCCCTGCCCTCA
TTTTGCATCACAGCCCATGGTCCAGGTGGTCACCACGATGCTTAGGACCCAAGTGTGAAG
CCCCTCGACTGCACAGCGCTTCACCTTGCAGGGCTGGACCTGCCGTAAACAGCGGCTCTC
CTTCCGGCATTGCCCTTGACCTGGCTCTGATCTGTTGAGGCTTTGGGTCCATTCAGCTCT
GTCCTGTCCCTCCACCCTCGTGACTGGCAATGACCCGGAAGGGGGCAGCACCCCCGCAGC
AGGTGGCCTCCAGAGCTGAGTCACTGCCCTGGGAATGGTGCCCTGGTGAGGCTGGCTCAG
GCAAATGGGCGAGCTCTCCGCCCTGGCAGAGCCCAGAGCCCAGGAGAAATAGATTCCTTG
TGCATCTAGAGGCATCACTGAGCTGATAAGAAAGTGAAGTAAAGGCAGCTGGAGACCCAG
AAGCAAACTGTCCCAATGATAGTTTCTAGCTGGGTCTTTGGCAGAGTCCAAAGCATTTTT
CTCACAATTTAACGTACGGGCCGTGGTTGTTTTATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACACTCAAATGCAGCGGGGTATCTTGCCGGCAGCGGGCGCTGTGGATTACTTTTGACAA
CCACAGAGACCTGATGGAAGTGGTATGGAATGTGGGAGCTGCCCTGTGGCCCTGCCCTCA
TTTTGCATCACAGCCCATGGTCCAGGTGGTCACCACGATGCTTAGGACCCAAGTGTGAAG
CCCCTCGACTGCACAGCGCTTCACCTTGCAGGGCTGGACCTGCCGTAAACAGCGGCTCTC
CTTCCGGCATTGCCCTTGACCTGGCTCTGATCTGTTGAGGCTTTGGGTCCATTCAGCTCT
GTCCTGTCCCTCCACCCTCGTGACTGGCAATGACCCGGAAGGGGGCAGCACCCCCGCAGC
AGGTGGCCTCCAGAGCTGAGTCACTGCCCTGGGAATGGTGCCCTGGTGAGGCTGGCTCAG
GCAAATGGGCGAGCTCTCCGCCCTGGCAGAGCCCAGAGCCCAGGAGAAATAGATTCCTTG
TGCATCTAGAGGCATCACTGAGCTGATAAGAAAGTGAAGTAAAGGCAGCTGGAGACCCAG
AAGCAAACTGTCCCAATGATAGTTTCTAGCTGGGTCTTTGGCAGAGTCCAAAGCATTTTT
CTCACAATTTAACGTACGGGCCGTGGTTGTTTTATTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               521-637, - strand, RNAz p=0.86906

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               521-637, - strand, RNAz p=0.86906

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               5-637, gnl|bosTau2|chr4 (51109382-51108724)
               

               
               5-637, gnl|Hg17|chr7 (130036762-130036130)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-637, gnl|bosTau2|chr4 (51109382-51108724)
               

               
               5-637, gnl|Hg17|chr7 (130036762-130036130)

	5-637, gnl\|bosTau2\|chr4 (51109382-51108724)
	5-637, gnl\|Hg17\|chr7 (130036762-130036130)