Liv1-LVRM10049C02
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTCAAAGACAAACGATTAAAGATCATGAATGAGATTCTCAGTGGGATCAAGATCCTGAAA TATTTTGCCTGGGAACCTTCCTTCCAAAACCAAGTCCACAACCTTCGGAAGAAGGAGCTC AGGAACCTGCTGACGTTTGGGCAACTGCAGTCCGTGATGATGTTTCTCTTAAACTTAACT CCTGTCCTGGTGTCTGTGGTCACATTTTCAGTCTATGTCCTGGTGGATAGCAATAATATC CTGGATGCAGAAAAGGCCTTCACCTCCATCACCCTCTTCAATATCCTACGCTTTCCGATG AGCATGCTTCCCATGGTAATCTCCTCCATGCTCCAGGCCAGTGTTTCTGTAGAACGGCTC GAGAAGTACTTGGGAGGGGATGACTTGGACACCTCTGCCATTCGACGTGACGGCAATTCT GACAAAGCAGTGCAGTTTTCTGAGGCCTCCTTTACCTGGGACCGTGATTTGGAAGCTACA GTCCGAGACGTGAACCTGGACATTATGCCAGGCCAGTTTGTGGCTGTGGTGGGCACTGTG GGCTCTGGGAAATCCTCCTTGATGTCAGCCATGCTGGGAGAAATGGAAAATATCCACGGG CATGTCACTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTCAAAGACAAACGATTAAAGATCATGAATGAGATTCTCAGTGGGATCAAGATCCTGAAA TATTTTGCCTGGGAACCTTCCTTCCAAAACCAAGTCCACAACCTTCGGAAGAAGGAGCTC AGGAACCTGCTGACGTTTGGGCAACTGCAGTCCGTGATGATGTTTCTCTTAAACTTAACT CCTGTCCTGGTGTCTGTGGTCACATTTTCAGTCTATGTCCTGGTGGATAGCAATAATATC CTGGATGCAGAAAAGGCCTTCACCTCCATCACCCTCTTCAATATCCTACGCTTTCCGATG AGCATGCTTCCCATGGTAATCTCCTCCATGCTCCAGGCCAGTGTTTCTGTAGAACGGCTC GAGAAGTACTTGGGAGGGGATGACTTGGACACCTCTGCCATTCGACGTGACGGCAATTCT GACAAAGCAGTGCAGTTTTCTGAGGCCTCCTTTACCTGGGACCGTGATTTGGAAGCTACA GTCCGAGACGTGAACCTGGACATTATGCCAGGCCAGTTTGTGGCTGTGGTGGGCACTGTG GGCTCTGGGAAATCCTCCTTGATGTCAGCCATGCTGGGAGAAATGGAAAATATCCACGGG CATGTCACTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 218-337, - strand, RNAz p=0.525281 | |
| 490-608, + strand, RNAz p=0.57833 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 218-337, - strand, RNAz p=0.525281 | |
| 490-608, + strand, RNAz p=0.57833 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 180-337, gnl|bosTau2|chr26 (12199677-12199520) | |
| 180-337, gnl|canFam2|chr28 (15704287-15704464) | |
| 180-337, gnl|danRer3|chr13 (105061-104889) | |
| 180-337, gnl|dasNov1|scaffold_10782 (55106-55285) | |
| 180-337, gnl|echTel1|scaffold_298425 (39102-38924) | |
| 180-337, gnl|fr1|chrUn (117898433-117898610) | |
| 180-337, gnl|galGal2|chr6 (21259428-21259250) | |
| 180-337, gnl|hg17|chr10 (101557805-101557983) | |
| 180-337, gnl|Hg17|chr10 (101557820-101557977) | |
| 180-337, gnl|loxAfr1|scaffold_20995 (24827-24649) | |
| 180-337, gnl|mm7|chr19 (43704964-43705142) | |
| 180-337, gnl|Mm7|chr19 (43704978-43705136) | |
| 180-337, gnl|monDom2|scaffold_14 (22372402-22372222) | |
| 180-337, gnl|oryCun1|scaffold_144755 (3365-3187) | |
| 180-337, gnl|panTro1|chr8 (103307206-103307384) | |
| 180-337, gnl|rheMac2|chr9 (99430877-99431055) | |
| 180-337, gnl|rn3|chr10 (490882-490712) | |
| 180-337, gnl|tetNig1|chr17 (5030246-5030419) | |
| 180-337, gnl|xenTro1|scaffold_194 (1639943-1639765) | |
| 490-608, gnl|bosTau2|chr26 (12194783-12194665) | |
| 490-608, gnl|canFam2|chr28 (15708759-15708923) | |
| 490-608, gnl|danRer3|chr13 (101493-101333) | |
| 490-608, gnl|dasNov1|scaffold_10782 (59511-59676) | |
| 490-608, gnl|echTel1|scaffold_298425 (33599-33434) | |
| 490-608, gnl|fr1|chrUn (117899325-117899472) | |
| 490-608, gnl|galGal2|chr6 (21258412-21258266) | |
| 490-608, gnl|hg17|chr10 (101562734-101562899) | |
| 490-608, gnl|Hg17|chr10 (101562766-101562884) | |
| 490-608, gnl|loxAfr1|scaffold_20995 (21135-20970) | |
| 490-608, gnl|mm7|chr19 (43708530-43708695) | |
| 490-608, gnl|Mm7|chr19 (43708562-43708680) | |
| 490-608, gnl|monDom2|scaffold_14 (22364932-22364765) | |
| 490-608, gnl|oryCun1|scaffold_209812 (18834-18958) | |
| 490-608, gnl|panTro1|chr8 (103312137-103312302) | |
| 490-608, gnl|rheMac2|chr9 (99434605-99434770) | |
| 490-608, gnl|rn3|chr10 (83018145-83017985) | |
| 490-608, gnl|tetNig1|chr17 (5030991-5031135) | |
| 490-608, gnl|xenTro1|scaffold_194 (1637465-1637308) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 180-337, gnl|bosTau2|chr26 (12199677-12199520) | |
| 180-337, gnl|canFam2|chr28 (15704287-15704464) | |
| 180-337, gnl|danRer3|chr13 (105061-104889) | |
| 180-337, gnl|dasNov1|scaffold_10782 (55106-55285) | |
| 180-337, gnl|echTel1|scaffold_298425 (39102-38924) | |
| 180-337, gnl|fr1|chrUn (117898433-117898610) | |
| 180-337, gnl|galGal2|chr6 (21259428-21259250) | |
| 180-337, gnl|hg17|chr10 (101557805-101557983) | |
| 180-337, gnl|Hg17|chr10 (101557820-101557977) | |
| 180-337, gnl|loxAfr1|scaffold_20995 (24827-24649) | |
| 180-337, gnl|mm7|chr19 (43704964-43705142) | |
| 180-337, gnl|Mm7|chr19 (43704978-43705136) | |
| 180-337, gnl|monDom2|scaffold_14 (22372402-22372222) | |
| 180-337, gnl|oryCun1|scaffold_144755 (3365-3187) | |
| 180-337, gnl|panTro1|chr8 (103307206-103307384) | |
| 180-337, gnl|rheMac2|chr9 (99430877-99431055) | |
| 180-337, gnl|rn3|chr10 (490882-490712) | |
| 180-337, gnl|tetNig1|chr17 (5030246-5030419) | |
| 180-337, gnl|xenTro1|scaffold_194 (1639943-1639765) | |
| 490-608, gnl|bosTau2|chr26 (12194783-12194665) | |
| 490-608, gnl|canFam2|chr28 (15708759-15708923) | |
| 490-608, gnl|danRer3|chr13 (101493-101333) | |
| 490-608, gnl|dasNov1|scaffold_10782 (59511-59676) | |
| 490-608, gnl|echTel1|scaffold_298425 (33599-33434) | |
| 490-608, gnl|fr1|chrUn (117899325-117899472) | |
| 490-608, gnl|galGal2|chr6 (21258412-21258266) | |
| 490-608, gnl|hg17|chr10 (101562734-101562899) | |
| 490-608, gnl|Hg17|chr10 (101562766-101562884) | |
| 490-608, gnl|loxAfr1|scaffold_20995 (21135-20970) | |
| 490-608, gnl|mm7|chr19 (43708530-43708695) | |
| 490-608, gnl|Mm7|chr19 (43708562-43708680) | |
| 490-608, gnl|monDom2|scaffold_14 (22364932-22364765) | |
| 490-608, gnl|oryCun1|scaffold_209812 (18834-18958) | |
| 490-608, gnl|panTro1|chr8 (103312137-103312302) | |
| 490-608, gnl|rheMac2|chr9 (99434605-99434770) | |
| 490-608, gnl|rn3|chr10 (83018145-83017985) | |
| 490-608, gnl|tetNig1|chr17 (5030991-5031135) | |
| 490-608, gnl|xenTro1|scaffold_194 (1637465-1637308) |