Liv1-LVRM10064C05
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAAATTAGAGAGAAGGCTAGATCATTTGCTAAAGCAGCGATTGAGAAACAGAAATCAGCC TTCATCCGTTGGGGAATAATGGCAGACTGGGATAATTGCTACTATACGTTTGATGGAAAA TATGAGGCTAGACAGTTGAGAATTTTCTACCAAATGTATGATAAGGGCTTGATTTATCGA TCTTACAAACCTGTATATTGGTCTCCCTCATCAAGAACTGCGTTGGCTGAAGCAGAACTT GAATATAATCCAGAGCATGTCAGTCGTTCAGTGTACGTCAAATTCCCTCTCTTGAAACCG TCTCCTAAGTTGGCATCTCTTATAGATGGTTCATCTCCTGTTAGTTTTTTAGTCTGGACC ACTCAGCCTTGGACAATTCCAGCCAATCAGGCTGTTTGTTACATGCCAGAATCAAAGTAT GCGGTTGTGAAGTGTTCCAAATCTGGAGACTTCTACATTCTAGCTGCAGATAAAGTAACA TCTGTTGCTTCTACTTTGGGAACAACTTTTGAGGTTATTTCAACATTCTCAGGTGTAGAC TTGGAAAGTGGTACTTGTACTCATCCTTTAATTGCTGAGCGAGCATCTCCTCTCTTACCT GCCAATCATGTGACCATGACAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAAATTAGAGAGAAGGCTAGATCATTTGCTAAAGCAGCGATTGAGAAACAGAAATCAGCC TTCATCCGTTGGGGAATAATGGCAGACTGGGATAATTGCTACTATACGTTTGATGGAAAA TATGAGGCTAGACAGTTGAGAATTTTCTACCAAATGTATGATAAGGGCTTGATTTATCGA TCTTACAAACCTGTATATTGGTCTCCCTCATCAAGAACTGCGTTGGCTGAAGCAGAACTT GAATATAATCCAGAGCATGTCAGTCGTTCAGTGTACGTCAAATTCCCTCTCTTGAAACCG TCTCCTAAGTTGGCATCTCTTATAGATGGTTCATCTCCTGTTAGTTTTTTAGTCTGGACC ACTCAGCCTTGGACAATTCCAGCCAATCAGGCTGTTTGTTACATGCCAGAATCAAAGTAT GCGGTTGTGAAGTGTTCCAAATCTGGAGACTTCTACATTCTAGCTGCAGATAAAGTAACA TCTGTTGCTTCTACTTTGGGAACAACTTTTGAGGTTATTTCAACATTCTCAGGTGTAGAC TTGGAAAGTGGTACTTGTACTCATCCTTTAATTGCTGAGCGAGCATCTCCTCTCTTACCT GCCAATCATGTGACCATGACAAAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 74-166, + strand, RNAz p=0.528556 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 74-166, + strand, RNAz p=0.528556 |
| Aligned organism(s): 56 entry(ies) | More info |
| Aligned organism(s): 56 entry(ies) | Help | Less info |
| 16-166, gnl|bosTau2|chr16 (11441333-11441183) | |
| 16-166, gnl|canFam2|chr38 (17883712-17883556) | |
| 16-166, gnl|canFam2|chr38 (17883533-17883713) | |
| 16-166, gnl|danRer3|chr17 (1340011-1339832) | |
| 16-166, gnl|dasNov1|scaffold_60121 (12265-12056) | |
| 16-166, gnl|dasNov1|scaffold_60121 (12034-12215) | |
| 16-166, gnl|echTel1|scaffold_286232 (77407-77620) | |
| 16-166, gnl|echTel1|scaffold_286232 (77643-77461) | |
| 16-166, gnl|fr1|chrUn (285545954-285545775) | |
| 16-166, gnl|galGal2|chr3 (15141673-15141505) | |
| 16-166, gnl|hg17|chr1 (216663849-216664029) | |
| 16-166, gnl|Hg17|chr1 (216663865-216664015) | |
| 16-166, gnl|hg17|chr8 (88682296-88682439) | |
| 16-166, gnl|loxAfr1|scaffold_33469 (33257-33038) | |
| 16-166, gnl|loxAfr1|scaffold_33469 (33019-33203) | |
| 16-166, gnl|mm7|chr1 (184849234-184849394) | |
| 16-166, gnl|mm7|chr1 (184849416-184849230) | |
| 16-166, gnl|Mm7|chr1 (184849395-184849245) | |
| 16-166, gnl|monDom2|scaffold_13 (26220359-26220537) | |
| 16-166, gnl|oryCun1|scaffold_172551 (51531-51396) | |
| 16-166, gnl|oryCun1|scaffold_172551 (51372-51551) | |
| 16-166, gnl|panTro1|chr1 (200388193-200388373) | |
| 16-166, gnl|panTro1|chr7 (90860508-90860651) | |
| 16-166, gnl|rheMac2|chr1 (150261181-150260987) | |
| 16-166, gnl|rheMac2|chr8 (90154498-90154641) | |
| 16-166, gnl|rn3|chr13 (101520776-101520936) | |
| 16-166, gnl|rn3|chr13 (101520958-101520773) | |
| 16-166, gnl|tetNig1|chrUn_random (116251481-116251667) | |
| 16-166, gnl|xenTro1|scaffold_39 (2637240-2637416) | |
| 214-351, gnl|bosTau2|chr16 (11440970-11440829) | |
| 214-351, gnl|canFam2|chr38 (17884123-17883919) | |
| 214-351, gnl|echTel1|scaffold_286232 (77012-77250) | |
| 214-351, gnl|Hg17|chr1 (216664230-216664371) | |
| 214-351, gnl|hg17|chr8 (88682125-88682238) | |
| 214-351, gnl|loxAfr1|scaffold_33469 (33618-33415) | |
| 214-351, gnl|mm7|chr1 (184848471-184848674) | |
| 214-351, gnl|Mm7|chr1 (184848683-184848543) | |
| 214-351, gnl|panTro1|chr7 (90860337-90860450) | |
| 214-351, gnl|rheMac2|chr8 (90154324-90154439) | |
| 214-351, gnl|rn3|chr13 (101520047-101520247) | |
| 417-542, gnl|bosTau2|chr16 (11440334-11440209) | |
| 417-542, gnl|canFam2|chr38 (17884692-17884929) | |
| 417-542, gnl|danRer3|chr17 (1338639-1338450) | |
| 417-542, gnl|dasNov1|scaffold_2795 (747-499) | |
| 417-542, gnl|echTel1|scaffold_286232 (76443-76208) | |
| 417-542, gnl|galGal2|chr3 (15140681-15140439) | |
| 417-542, gnl|hg17|chr1 (216665132-216665368) | |
| 417-542, gnl|Hg17|chr1 (216665184-216665309) | |
| 417-542, gnl|loxAfr1|scaffold_33469 (33999-34240) | |
| 417-542, gnl|mm7|chr1 (184848148-184847910) | |
| 417-542, gnl|Mm7|chr1 (184848094-184847969) | |
| 417-542, gnl|monDom2|scaffold_13 (26222520-26222754) | |
| 417-542, gnl|panTro1|chr1 (200389478-200389716) | |
| 417-542, gnl|rheMac2|chr1 (150259889-150259652) | |
| 417-542, gnl|rn3|chr13 (101519730-101519492) | |
| 417-542, gnl|xenTro1|scaffold_39 (2639118-2639358) |
| Aligned organism(s): 56 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 16-166, gnl|bosTau2|chr16 (11441333-11441183) | |
| 16-166, gnl|canFam2|chr38 (17883712-17883556) | |
| 16-166, gnl|canFam2|chr38 (17883533-17883713) | |
| 16-166, gnl|danRer3|chr17 (1340011-1339832) | |
| 16-166, gnl|dasNov1|scaffold_60121 (12265-12056) | |
| 16-166, gnl|dasNov1|scaffold_60121 (12034-12215) | |
| 16-166, gnl|echTel1|scaffold_286232 (77407-77620) | |
| 16-166, gnl|echTel1|scaffold_286232 (77643-77461) | |
| 16-166, gnl|fr1|chrUn (285545954-285545775) | |
| 16-166, gnl|galGal2|chr3 (15141673-15141505) | |
| 16-166, gnl|hg17|chr1 (216663849-216664029) | |
| 16-166, gnl|Hg17|chr1 (216663865-216664015) | |
| 16-166, gnl|hg17|chr8 (88682296-88682439) | |
| 16-166, gnl|loxAfr1|scaffold_33469 (33257-33038) | |
| 16-166, gnl|loxAfr1|scaffold_33469 (33019-33203) | |
| 16-166, gnl|mm7|chr1 (184849234-184849394) | |
| 16-166, gnl|mm7|chr1 (184849416-184849230) | |
| 16-166, gnl|Mm7|chr1 (184849395-184849245) | |
| 16-166, gnl|monDom2|scaffold_13 (26220359-26220537) | |
| 16-166, gnl|oryCun1|scaffold_172551 (51531-51396) | |
| 16-166, gnl|oryCun1|scaffold_172551 (51372-51551) | |
| 16-166, gnl|panTro1|chr1 (200388193-200388373) | |
| 16-166, gnl|panTro1|chr7 (90860508-90860651) | |
| 16-166, gnl|rheMac2|chr1 (150261181-150260987) | |
| 16-166, gnl|rheMac2|chr8 (90154498-90154641) | |
| 16-166, gnl|rn3|chr13 (101520776-101520936) | |
| 16-166, gnl|rn3|chr13 (101520958-101520773) | |
| 16-166, gnl|tetNig1|chrUn_random (116251481-116251667) | |
| 16-166, gnl|xenTro1|scaffold_39 (2637240-2637416) | |
| 214-351, gnl|bosTau2|chr16 (11440970-11440829) | |
| 214-351, gnl|canFam2|chr38 (17884123-17883919) | |
| 214-351, gnl|echTel1|scaffold_286232 (77012-77250) | |
| 214-351, gnl|Hg17|chr1 (216664230-216664371) | |
| 214-351, gnl|hg17|chr8 (88682125-88682238) | |
| 214-351, gnl|loxAfr1|scaffold_33469 (33618-33415) | |
| 214-351, gnl|mm7|chr1 (184848471-184848674) | |
| 214-351, gnl|Mm7|chr1 (184848683-184848543) | |
| 214-351, gnl|panTro1|chr7 (90860337-90860450) | |
| 214-351, gnl|rheMac2|chr8 (90154324-90154439) | |
| 214-351, gnl|rn3|chr13 (101520047-101520247) | |
| 417-542, gnl|bosTau2|chr16 (11440334-11440209) | |
| 417-542, gnl|canFam2|chr38 (17884692-17884929) | |
| 417-542, gnl|danRer3|chr17 (1338639-1338450) | |
| 417-542, gnl|dasNov1|scaffold_2795 (747-499) | |
| 417-542, gnl|echTel1|scaffold_286232 (76443-76208) | |
| 417-542, gnl|galGal2|chr3 (15140681-15140439) | |
| 417-542, gnl|hg17|chr1 (216665132-216665368) | |
| 417-542, gnl|Hg17|chr1 (216665184-216665309) | |
| 417-542, gnl|loxAfr1|scaffold_33469 (33999-34240) | |
| 417-542, gnl|mm7|chr1 (184848148-184847910) | |
| 417-542, gnl|Mm7|chr1 (184848094-184847969) | |
| 417-542, gnl|monDom2|scaffold_13 (26222520-26222754) | |
| 417-542, gnl|panTro1|chr1 (200389478-200389716) | |
| 417-542, gnl|rheMac2|chr1 (150259889-150259652) | |
| 417-542, gnl|rn3|chr13 (101519730-101519492) | |
| 417-542, gnl|xenTro1|scaffold_39 (2639118-2639358) |