Liv1-LVRM10074A03
|
AACACGCTGGCAACCATTTGTAATGTGTCCTCTCCATGCTCACTGTCTTTTCCCAATTCT
TACCTTTCTTTTCTCTTTTCAGGAAACATCTTTCTCCAGCAGCCAAGTTACTATAATGAC
CTGGATGCAACCGTGCCCACCATCCTTCAGGTCTTCAGCAATATCCTCCAGCACTGTGGT
TTGCAAGGGGACGGGGCCAGCGCCATACCCCAGAAGCTGGAGGAGAGGAGCCGGCTGACC
CCCAGCGACATGCCTCTCCTGGAACTAAAGGACATTGTTCTCTACCTTTGTGATACCTGC
ACCACACTCTGGGCCTTCCTGGATATCTTCCCTTTGGCTTGCCAGACCTTCCAGAAACAC
GACTTCTGTTACAGGCTAGCTTCCTTTTACGAGATAGCAATCCCGGAACTGGAATCTGCG
ATTAAGAAGAGAAGGCTTGAAGATAGCAAGCTGCTAGGTGACCTGTGGCAGAGGCTCTCC
CATTCCAGGAAGAAGCTACTGGAGATTTTTCACATCCTCCTGAACCAGATCTGCCTTCTC
CCAGTCCTCGAAAGCAGGTAAGCCCTGGGGAGCCACCACCCCAGTGGAAGAGCCTCCTCC
CCAGGCCCAGCAGAGGTATTTCGCTCACTTCATCTGCTCCCTCCCCTGCTCTGAGCTTGC
TGAGCACAGATGGTACACCAAGAAAAATGCTTTGGTTCCTCCNA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AACACGCTGGCAACCATTTGTAATGTGTCCTCTCCATGCTCACTGTCTTTTCCCAATTCT
TACCTTTCTTTTCTCTTTTCAGGAAACATCTTTCTCCAGCAGCCAAGTTACTATAATGAC
CTGGATGCAACCGTGCCCACCATCCTTCAGGTCTTCAGCAATATCCTCCAGCACTGTGGT
TTGCAAGGGGACGGGGCCAGCGCCATACCCCAGAAGCTGGAGGAGAGGAGCCGGCTGACC
CCCAGCGACATGCCTCTCCTGGAACTAAAGGACATTGTTCTCTACCTTTGTGATACCTGC
ACCACACTCTGGGCCTTCCTGGATATCTTCCCTTTGGCTTGCCAGACCTTCCAGAAACAC
GACTTCTGTTACAGGCTAGCTTCCTTTTACGAGATAGCAATCCCGGAACTGGAATCTGCG
ATTAAGAAGAGAAGGCTTGAAGATAGCAAGCTGCTAGGTGACCTGTGGCAGAGGCTCTCC
CATTCCAGGAAGAAGCTACTGGAGATTTTTCACATCCTCCTGAACCAGATCTGCCTTCTC
CCAGTCCTCGAAAGCAGGTAAGCCCTGGGGAGCCACCACCCCAGTGGAAGAGCCTCCTCC
CCAGGCCCAGCAGAGGTATTTCGCTCACTTCATCTGCTCCCTCCCCTGCTCTGAGCTTGC
TGAGCACAGATGGTACACCAAGAAAAATGCTTTGGTTCCTCCNA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
148-259, gnl|bosTau2|chr17 (41670762-41670651) |
|
148-259, gnl|canFam2|chr26 (26020394-26020521) |
|
148-259, gnl|dasNov1|scaffold_93805 (2517-2623) |
|
148-259, gnl|echTel1|scaffold_294358 (8587-8460) |
|
148-259, gnl|galGal2|chr15 (10890971-10890841) |
|
148-259, gnl|hg17|chr22 (28535203-28535330) |
|
148-259, gnl|Hg17|chr22 (28535313-28535202) |
|
148-259, gnl|loxAfr1|scaffold_428 (45005-44878) |
|
148-259, gnl|mm7|chr11 (4610327-4610201) |
|
148-259, gnl|Mm7|chr11 (4610215-4610326) |
|
148-259, gnl|monDom2|scaffold_89 (3679958-3680091) |
|
148-259, gnl|oryCun1|scaffold_199569 (2527-2654) |
|
148-259, gnl|panTro1|chr23 (28636095-28636222) |
|
148-259, gnl|rheMac2|chr10 (73669987-73670114) |
|
148-259, gnl|rn3|chr14 (85317062-85316936) |
| |
|
450-701, gnl|bosTau2|chr17 (41665209-41664954) |
|
450-701, gnl|Hg17|chr22 (28527447-28527195) |
|
450-701, gnl|Mm7|chr11 (4620318-4620523) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
148-259, gnl|bosTau2|chr17 (41670762-41670651) |
|
148-259, gnl|canFam2|chr26 (26020394-26020521) |
|
148-259, gnl|dasNov1|scaffold_93805 (2517-2623) |
|
148-259, gnl|echTel1|scaffold_294358 (8587-8460) |
|
148-259, gnl|galGal2|chr15 (10890971-10890841) |
|
148-259, gnl|hg17|chr22 (28535203-28535330) |
|
148-259, gnl|Hg17|chr22 (28535313-28535202) |
|
148-259, gnl|loxAfr1|scaffold_428 (45005-44878) |
|
148-259, gnl|mm7|chr11 (4610327-4610201) |
|
148-259, gnl|Mm7|chr11 (4610215-4610326) |
|
148-259, gnl|monDom2|scaffold_89 (3679958-3680091) |
|
148-259, gnl|oryCun1|scaffold_199569 (2527-2654) |
|
148-259, gnl|panTro1|chr23 (28636095-28636222) |
|
148-259, gnl|rheMac2|chr10 (73669987-73670114) |
|
148-259, gnl|rn3|chr14 (85317062-85316936) |
| |
|
450-701, gnl|bosTau2|chr17 (41665209-41664954) |
|
450-701, gnl|Hg17|chr22 (28527447-28527195) |
|
450-701, gnl|Mm7|chr11 (4620318-4620523) |
