Non-Coding RNA Search

Liv1-LVRM10126B12

Sequence:


               
               CTTTCAAGAATATTTAAGTAGACTTCAATTTCACAATAATATTGAGAAATCTCGAAAGTT
TAGACATATAAAAGCATTCCTCTTATTTTCCTCTGTATTGTATGTGAACCAGGATCCAGC
ATAATTACAAATGTTTCATCAGTAGTGCCTGGAGAAGATTTATTTCTTACATCTCCTGTA
TCTTCTGTTGTTCTCTTTTGTGCTTGGTGCGCCTTCAGTCAGCGTAGTCTGACACGCTTT
GTGGCCTTTGCCTCCTGTGATAAAATAGATTGAAATGATTCCTGACACCATCTGCTGAAG
AAGAGCAGCCCTGGAGGACTGTGCTTTGAGAGAAAGTAACTGAATGCTAAGAAATGTGGA
AGTCTAGGGACATAGGCAAAGGATTTTTTTTTTTTTTTTTAAAGAGCATGAACATTAATA
CATCTTCTTGAGGTTTGATGGGACATGTACTGCCTACTGCCCCATCTGGTGCTTATGATA
GCATGGCATATTAGCATGCTGCAAGTTCATAATGTATTCAGGGGGAGGAAACAGCCCTTG
CATACCAATTGAGGCATCCTCTCTTTCAGAACTGCTTTTGAATTTCAATGATGTTTATAT
CTTCCAAGCCGTGACTGAACTGAGCATTTCCGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTCAAGAATATTTAAGTAGACTTCAATTTCACAATAATATTGAGAAATCTCGAAAGTT
TAGACATATAAAAGCATTCCTCTTATTTTCCTCTGTATTGTATGTGAACCAGGATCCAGC
ATAATTACAAATGTTTCATCAGTAGTGCCTGGAGAAGATTTATTTCTTACATCTCCTGTA
TCTTCTGTTGTTCTCTTTTGTGCTTGGTGCGCCTTCAGTCAGCGTAGTCTGACACGCTTT
GTGGCCTTTGCCTCCTGTGATAAAATAGATTGAAATGATTCCTGACACCATCTGCTGAAG
AAGAGCAGCCCTGGAGGACTGTGCTTTGAGAGAAAGTAACTGAATGCTAAGAAATGTGGA
AGTCTAGGGACATAGGCAAAGGATTTTTTTTTTTTTTTTTAAAGAGCATGAACATTAATA
CATCTTCTTGAGGTTTGATGGGACATGTACTGCCTACTGCCCCATCTGGTGCTTATGATA
GCATGGCATATTAGCATGCTGCAAGTTCATAATGTATTCAGGGGGAGGAAACAGCCCTTG
CATACCAATTGAGGCATCCTCTCTTTCAGAACTGCTTTTGAATTTCAATGATGTTTATAT
CTTCCAAGCCGTGACTGAACTGAGCATTTCCGCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               383-581, + strand, RNAz p=0.988041

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               383-581, + strand, RNAz p=0.988041

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-581, gnl|bosTau2|chr14 (45440632-45440063)
               

               
               1-581, gnl|Hg17|chr8 (93133685-93133115)
               

               
               1-581, gnl|Mm7|chr4 (13723798-13724386)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-581, gnl|bosTau2|chr14 (45440632-45440063)
               

               
               1-581, gnl|Hg17|chr8 (93133685-93133115)
               

               
               1-581, gnl|Mm7|chr4 (13723798-13724386)

	1-581, gnl\|bosTau2\|chr14 (45440632-45440063)
	1-581, gnl\|Hg17\|chr8 (93133685-93133115)
	1-581, gnl\|Mm7\|chr4 (13723798-13724386)