Non-Coding RNA Search

Liv1-LVRM10145C03

Sequence:


               
               AGCGGCAGTTCGGCAGCGTGCCGCCCGTGCGCCGGCTGGGCCACGACGCGCAGCCCATGA
ACCCCCTGGACGCAGCCATCCTGGCGCAGCGCTACCTGCGGAAATAGCAGCTCGGGCAGG
GGCACCAGCACCACCCAGCGCCTCTCCTGGCCCCCAGCCGGTGGCCTGGCTGCCGGGCCG
CCCCGTCGTGCTGAACTCTCCCAGGCTGCAGTGGGGACGGGGCAGGGCCAGCCCAGGGCA
CATGGGGTCAGCAGAGGTACCACGAAGCTACCTTTTGGAATGATTGCTTGATTGTTTGGT
TTTTTAATCTGAGAAGCCTAGATAACTAATCTGCTTTTAATCATGACGTTTTAATCTACC
TCTGTCTCTTTAACCATGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCGGCAGTTCGGCAGCGTGCCGCCCGTGCGCCGGCTGGGCCACGACGCGCAGCCCATGA
ACCCCCTGGACGCAGCCATCCTGGCGCAGCGCTACCTGCGGAAATAGCAGCTCGGGCAGG
GGCACCAGCACCACCCAGCGCCTCTCCTGGCCCCCAGCCGGTGGCCTGGCTGCCGGGCCG
CCCCGTCGTGCTGAACTCTCCCAGGCTGCAGTGGGGACGGGGCAGGGCCAGCCCAGGGCA
CATGGGGTCAGCAGAGGTACCACGAAGCTACCTTTTGGAATGATTGCTTGATTGTTTGGT
TTTTTAATCTGAGAAGCCTAGATAACTAATCTGCTTTTAATCATGACGTTTTAATCTACC
TCTGTCTCTTTAACCATGCTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               253-369, - strand, RNAz p=0.653802

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               253-369, - strand, RNAz p=0.653802

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-381, gnl|bosTau2|chr3 (76594111-76594488)
               

               
               1-381, gnl|Hg17|chr1 (36476555-36476165)
               

               
               1-381, gnl|Mm7|chr4 (125583569-125583968)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-381, gnl|bosTau2|chr3 (76594111-76594488)
               

               
               1-381, gnl|Hg17|chr1 (36476555-36476165)
               

               
               1-381, gnl|Mm7|chr4 (125583569-125583968)

	1-381, gnl\|bosTau2\|chr3 (76594111-76594488)
	1-381, gnl\|Hg17\|chr1 (36476555-36476165)
	1-381, gnl\|Mm7\|chr4 (125583569-125583968)