Non-Coding RNA Search

Liv1-LVRM10154B01

Sequence:


               
               CTACTGGGACTTCCGGCGGGGCGGAGGAGGCGGGAGAGTGAGGGAAAGGCTGGAAGACGA
GCCTGCAGGATGTTTCCTCAGTGAAAGGAAGGCTGTTGCACCATGGCGGTTTTTGATACT
CCGGAGGAGGCCTTCGGCGTCTTGCGTCCTGTCTGTGTTCAGCTCACGAAGGCGCAGACC
GTGGAGAATGTGGCGCACCTGCAGGCACAGTTACAAGCCGTGAGTGACTCTGCCCTTCAG
GAACTTCAACAGTACATCCTCTTCCCTTTGCGATTTACCCTGAAGACCCCAGGTCCCAAA
AGAGAACGCTTGATCCAGAGCGTGGTGGAGTGCATCACCTTTGTCCTCTCTTCCACATGT
GTGAAGGAGCAAGAACTTCTCCAGGAACTCTTTTCGGAGCTGTCTGCTTGCCTGTATTCG
CCCAGCTCCCAAAAACCCGCTGCTGTGTCAGAGGAGTTGAAACTGGCGGTGATCCAGGGC
CTTAGCACATTAATGCACGCAGCCTACGGGGACATCATTCTGTCTTTTTATGAACCCTCC
GTTCTGCCTCGTTTAGGATTTGCTGTATCTTTACTCTTAGGCCTAGCAGAGCAGGAGANA
TCCAGACAGATTAAAATGGCTGCCCTGAAATGTTTACAGGTTCTCCTCTTTCAGTGCGAC
TGTCAAGGCCATCCGAGGTCCTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTACTGGGACTTCCGGCGGGGCGGAGGAGGCGGGAGAGTGAGGGAAAGGCTGGAAGACGA
GCCTGCAGGATGTTTCCTCAGTGAAAGGAAGGCTGTTGCACCATGGCGGTTTTTGATACT
CCGGAGGAGGCCTTCGGCGTCTTGCGTCCTGTCTGTGTTCAGCTCACGAAGGCGCAGACC
GTGGAGAATGTGGCGCACCTGCAGGCACAGTTACAAGCCGTGAGTGACTCTGCCCTTCAG
GAACTTCAACAGTACATCCTCTTCCCTTTGCGATTTACCCTGAAGACCCCAGGTCCCAAA
AGAGAACGCTTGATCCAGAGCGTGGTGGAGTGCATCACCTTTGTCCTCTCTTCCACATGT
GTGAAGGAGCAAGAACTTCTCCAGGAACTCTTTTCGGAGCTGTCTGCTTGCCTGTATTCG
CCCAGCTCCCAAAAACCCGCTGCTGTGTCAGAGGAGTTGAAACTGGCGGTGATCCAGGGC
CTTAGCACATTAATGCACGCAGCCTACGGGGACATCATTCTGTCTTTTTATGAACCCTCC
GTTCTGCCTCGTTTAGGATTTGCTGTATCTTTACTCTTAGGCCTAGCAGAGCAGGAGANA
TCCAGACAGATTAAAATGGCTGCCCTGAAATGTTTACAGGTTCTCCTCTTTCAGTGCGAC
TGTCAAGGCCATCCGAGGTCCTGGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               299-458, - strand, RNAz p=0.842381

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               299-458, - strand, RNAz p=0.842381

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               60-685, gnl|bosTau2|chr13 (48705939-48706564)
               

               
               60-685, gnl|Hg17|chr20 (36075675-36075050)
               

               
               60-685, gnl|Mm7|chr2 (157750250-157749625)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               60-685, gnl|bosTau2|chr13 (48705939-48706564)
               

               
               60-685, gnl|Hg17|chr20 (36075675-36075050)
               

               
               60-685, gnl|Mm7|chr2 (157750250-157749625)

	60-685, gnl\|bosTau2\|chr13 (48705939-48706564)
	60-685, gnl\|Hg17\|chr20 (36075675-36075050)
	60-685, gnl\|Mm7\|chr2 (157750250-157749625)