Non-Coding RNA Search

Liv1-LVRM10162A11

Sequence:


               
               TAATTAAATTAAAACCCAGTGGGGAAGGTAGAAAATGTAAATGAAACGAGATGGGCTATG
AGGCGATGAATGCACCTGGGTTCATCATCCTAGTTGCTCTGTTTTTATATGTGTTTGAAA
TTTCCATAATAAAAAGCTCCTGAGAAGGGAGGGCCTCCCCTCCACAGCCTCTCTGCTTCT
CTGACCCCACACCAGGACCCTGGCATCTCTGGTCTAACAAGGGAATCAGGACAGAGCCAC
CACCACTCAGCCCGGTTTCACACACGCCCAACGATGACTTCGGTCCCAGGCTAACCAGCA
AGGCCATGGGCGCTGAGAGAGCCTGCCAGAGCCAGCCATGCAGTGAGTGTCCCTGTCGGG
GCCCTGGGGTTCTAGGAGCTGGGGCGGGGGCCCTGTCTAGGGGTCAGGCCAGAGATCTGG
GGCCTCAAGGAGGCCTGCCCTCTGTTCTCTACACCCCTCCCCAACCAGATCTGCACCCCT
GACTGCTGTCTGGGGTCCTGGGTGTCCCACGGTAGGCCCTGCCCTCCTCTGAGACTCGGT
CAACATTTTAATTCTGACCAATCANGGTTTCTGGGTGACAGAGAAAAGAACCTATGGGAG
GCACTAGCCCCATCTCTCGCCCATCTATCTCAGCGGCCACCATCACTCTCAGCTGTCCAG
TGGGCCACAGCCCCATGGGAGCCAGGCTGGGTCTCCGGCTGCTCCGGGAGTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAATTAAATTAAAACCCAGTGGGGAAGGTAGAAAATGTAAATGAAACGAGATGGGCTATG
AGGCGATGAATGCACCTGGGTTCATCATCCTAGTTGCTCTGTTTTTATATGTGTTTGAAA
TTTCCATAATAAAAAGCTCCTGAGAAGGGAGGGCCTCCCCTCCACAGCCTCTCTGCTTCT
CTGACCCCACACCAGGACCCTGGCATCTCTGGTCTAACAAGGGAATCAGGACAGAGCCAC
CACCACTCAGCCCGGTTTCACACACGCCCAACGATGACTTCGGTCCCAGGCTAACCAGCA
AGGCCATGGGCGCTGAGAGAGCCTGCCAGAGCCAGCCATGCAGTGAGTGTCCCTGTCGGG
GCCCTGGGGTTCTAGGAGCTGGGGCGGGGGCCCTGTCTAGGGGTCAGGCCAGAGATCTGG
GGCCTCAAGGAGGCCTGCCCTCTGTTCTCTACACCCCTCCCCAACCAGATCTGCACCCCT
GACTGCTGTCTGGGGTCCTGGGTGTCCCACGGTAGGCCCTGCCCTCCTCTGAGACTCGGT
CAACATTTTAATTCTGACCAATCANGGTTTCTGGGTGACAGAGAAAAGAACCTATGGGAG
GCACTAGCCCCATCTCTCGCCCATCTATCTCAGCGGCCACCATCACTCTCAGCTGTCCAG
TGGGCCACAGCCCCATGGGAGCCAGGCTGGGTCTCCGGCTGCTCCGGGAGTGA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               363-539, + strand, RNAz p=0.999924

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               363-539, + strand, RNAz p=0.999924

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_172374, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_172374, +

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               13-575, gnl|bosTau2|chr18 (48928621-48928073)
               

               
               13-575, gnl|Hg17|chr19 (55097041-55096480)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-575, gnl|bosTau2|chr18 (48928621-48928073)
               

               
               13-575, gnl|Hg17|chr19 (55097041-55096480)

	13-575, gnl\|bosTau2\|chr18 (48928621-48928073)
	13-575, gnl\|Hg17\|chr19 (55097041-55096480)