Non-Coding RNA Search

Liv1-LVRM1A010197

Sequence:


               
               TTACCTGAAAGGCCACCACGTCCGTTTTCTTTCCGACAGTTTGAAGAGTCACAGGGTATT
TTATGAACTAATGAGTGTTTACCAGGAGTTAGCAGCTTGATGTTGGGTGACCTGAGAAAT
AATGGAGGTGGTTTCACTGAAGCTTCTCAGCAGCCTTGCAAGGCTGGGCTTGGTGTCCTA
GTGGTGGAGGTGTCGGAACTTGCTCACCCTTACAGATGAAGCAGCGAGGGGAGCTCCTTC
CAAGGCCGGGCTTCCGATCCTAGCCCAAGGCTCTGCTCTAGCCCAGGTTCATCTTTTGAA
GGATTATGGAATAATTCAGAATATGGATCGCAGTTCTATTTAGGAATGTCCTAGATCTTT
GAATGAGCACCGCCACTGTTCAAAAATGAGTCTGTTTCTTTGTTCTATTTAGGACACAGT
GTTTATTTTGAAGGGCTTAAAAGAGGCAATGTGTTCATTGCTTATTTTGAAGAAAAGTGT
AGCCAGCTACTGATAGGAATTTGACCTGTTGATTGCTTCGTGCGTGCCAGATGCTCTGCC
CTGAAAGCATTACTTTATAATACCTGACTGATCAATTATTTGAACTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTACCTGAAAGGCCACCACGTCCGTTTTCTTTCCGACAGTTTGAAGAGTCACAGGGTATT
TTATGAACTAATGAGTGTTTACCAGGAGTTAGCAGCTTGATGTTGGGTGACCTGAGAAAT
AATGGAGGTGGTTTCACTGAAGCTTCTCAGCAGCCTTGCAAGGCTGGGCTTGGTGTCCTA
GTGGTGGAGGTGTCGGAACTTGCTCACCCTTACAGATGAAGCAGCGAGGGGAGCTCCTTC
CAAGGCCGGGCTTCCGATCCTAGCCCAAGGCTCTGCTCTAGCCCAGGTTCATCTTTTGAA
GGATTATGGAATAATTCAGAATATGGATCGCAGTTCTATTTAGGAATGTCCTAGATCTTT
GAATGAGCACCGCCACTGTTCAAAAATGAGTCTGTTTCTTTGTTCTATTTAGGACACAGT
GTTTATTTTGAAGGGCTTAAAAGAGGCAATGTGTTCATTGCTTATTTTGAAGAAAAGTGT
AGCCAGCTACTGATAGGAATTTGACCTGTTGATTGCTTCGTGCGTGCCAGATGCTCTGCC
CTGAAAGCATTACTTTATAATACCTGACTGATCAATTATTTGAACTAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               284-403, + strand, RNAz p=0.653993

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               284-403, + strand, RNAz p=0.653993

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-558, gnl|bosTau2|chr7 (32231078-32230512)
               

               
               1-558, gnl|Hg17|chr5 (134294948-134295537)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-558, gnl|bosTau2|chr7 (32231078-32230512)
               

               
               1-558, gnl|Hg17|chr5 (134294948-134295537)

	1-558, gnl\|bosTau2\|chr7 (32231078-32230512)
	1-558, gnl\|Hg17\|chr5 (134294948-134295537)