Non-Coding RNA Search

Liv1-LVRM1A030193

Sequence:


               
               TGGTTTGATTTATGAATTAACTTGAATAATATCTTCATATTTAGAATTATGTACAGAGAA
ATGAAGGATTCTGACAAAGAAAAAGAAAATGGAAAAATGGTAAGTTAATTTTAGAAAATG
GATCTTTTTCTTGGCTGCTTAGTAATGGAATAGAAAAGCAAAGAAAAACTAACACCGTGT
TTCAGTTGAACAATTGCGAGAGAGATCAACATGAGCTTCTTTATGTTAAATGCATGATCT
TAAAGCTACATTATGTAGTGCATGTGAAATAGCATAGACTTTATAATCAGGACAGACCAA
CATTTGGTTTTTGCAATTGTAGGGTTGTCGGTCTATAGAGCATGTGGAACAGTACCTTGG
CACTGATGAATTACCAAAGAATGACTTGATAACCTACCTGCATAAGAATGCAGACGCCGC
TTTCCTGCGCCACTGGAAATTAACTGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGTTTGATTTATGAATTAACTTGAATAATATCTTCATATTTAGAATTATGTACAGAGAA
ATGAAGGATTCTGACAAAGAAAAAGAAAATGGAAAAATGGTAAGTTAATTTTAGAAAATG
GATCTTTTTCTTGGCTGCTTAGTAATGGAATAGAAAAGCAAAGAAAAACTAACACCGTGT
TTCAGTTGAACAATTGCGAGAGAGATCAACATGAGCTTCTTTATGTTAAATGCATGATCT
TAAAGCTACATTATGTAGTGCATGTGAAATAGCATAGACTTTATAATCAGGACAGACCAA
CATTTGGTTTTTGCAATTGTAGGGTTGTCGGTCTATAGAGCATGTGGAACAGTACCTTGG
CACTGATGAATTACCAAAGAATGACTTGATAACCTACCTGCATAAGAATGCAGACGCCGC
TTTCCTGCGCCACTGGAAATTAACTGGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               244-403, - strand, RNAz p=0.988515

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               244-403, - strand, RNAz p=0.988515

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-448, gnl|bosTau2|chr1 (59514549-59514096)
               

               
               4-448, gnl|Hg17|chr14 (30653333-30652891)
               

               
               4-448, gnl|Mm7|chr12 (49769994-49767831)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-448, gnl|bosTau2|chr1 (59514549-59514096)
               

               
               4-448, gnl|Hg17|chr14 (30653333-30652891)
               

               
               4-448, gnl|Mm7|chr12 (49769994-49767831)

	4-448, gnl\|bosTau2\|chr1 (59514549-59514096)
	4-448, gnl\|Hg17\|chr14 (30653333-30652891)
	4-448, gnl\|Mm7\|chr12 (49769994-49767831)