Non-Coding RNA Search

Liv1-LVRM1C050097

Sequence:


               
               AGTCTGAATTTTGCTGATTGCATTTTTGTGGTGCTCTGTAGAATGGTTTTCTGTCTCTTC
ATTGCCTGTGAATTCATAGTTGGATCTTGCGGTTTGTTGCTGATCCCGATGATCACAGGT
GAGGAGGTTCCAGCTGAGAAGACGGAGCAGATGCTGGCAGAGGTGAAGAACAACCTGAAG
CTTTTTGAGGAAAAGTTTTTGCAGGACAAGCTGTTCATTGCTGGGGACAACATCTCCCTG
GCCGACTTGGTCGCCCTGGTGGAAATGATGCAGCCCATGGGGGGCAACCATAACGTCTTT
CTCAACAGTTCCAAGCTGGCTGAGTGGCGCATGAGGGTGGAGCTGGCCATTGGCTCTGGC
CTCTTCTGGGAGGCCCATGACCGGCTGGTAAAGCTGACGGAGTGGGACTGTTCAACCCTG
GATCCAATGGTCAAGGAGAGGATCTGTGATTTGCTGCAGAAGTTCAAGTAGAAGTAGCCT
ACCCTGCAGGGCCTGGCCAGCTCAGCCCTCAAAGCCTCCTTCCTTCTGGGAGATGCTGCA
AACCACTGTTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTCTGAATTTTGCTGATTGCATTTTTGTGGTGCTCTGTAGAATGGTTTTCTGTCTCTTC
ATTGCCTGTGAATTCATAGTTGGATCTTGCGGTTTGTTGCTGATCCCGATGATCACAGGT
GAGGAGGTTCCAGCTGAGAAGACGGAGCAGATGCTGGCAGAGGTGAAGAACAACCTGAAG
CTTTTTGAGGAAAAGTTTTTGCAGGACAAGCTGTTCATTGCTGGGGACAACATCTCCCTG
GCCGACTTGGTCGCCCTGGTGGAAATGATGCAGCCCATGGGGGGCAACCATAACGTCTTT
CTCAACAGTTCCAAGCTGGCTGAGTGGCGCATGAGGGTGGAGCTGGCCATTGGCTCTGGC
CTCTTCTGGGAGGCCCATGACCGGCTGGTAAAGCTGACGGAGTGGGACTGTTCAACCCTG
GATCCAATGGTCAAGGAGAGGATCTGTGATTTGCTGCAGAAGTTCAAGTAGAAGTAGCCT
ACCCTGCAGGGCCTGGCCAGCTCAGCCCTCAAAGCCTCCTTCCTTCTGGGAGATGCTGCA
AACCACTGTTTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61879977|ref|XP_582488.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61879977|ref|XP_582488.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               271-389, + strand, RNAz p=0.640606

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               271-389, + strand, RNAz p=0.640606

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               271-552, gnl|bosTau2|chr17 (41540837-41541117)
               

               
               271-552, gnl|Hg17|chr22 (22609339-22609646)
               

               
               271-552, gnl|Mm7|chr10 (75470912-75470626)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               271-552, gnl|bosTau2|chr17 (41540837-41541117)
               

               
               271-552, gnl|Hg17|chr22 (22609339-22609646)
               

               
               271-552, gnl|Mm7|chr10 (75470912-75470626)

	271-552, gnl\|bosTau2\|chr17 (41540837-41541117)
	271-552, gnl\|Hg17\|chr22 (22609339-22609646)
	271-552, gnl\|Mm7\|chr10 (75470912-75470626)