Non-Coding RNA Search

Liv1-LVRM1C050186

Sequence:


               
               TTTTCCTCCCTCATTTCATAGAAAGAGGTTTGTTTGTTTGTTTTTAAAGCACTTAGTTAT
AATTTTATTTTTTTAATCCAGTTCTCTCTAACTCTGGCTTTTGCTATCAAACCATTCAAA
AGTTGGATCTGAGTTTGGAGAAACAGCTTCCCAACTGAAGAGGGTGTGATTTTGCAACAT
GTTTAATAGTTTCTATTTGTTGGCTAGACCTTTCCAGAGTGTGTCTTCTGAAGTGAGAAG
TCACTCTGCATTTCAAGTACTCCTTTCCTCCAACCCTGTGGTACTTGAATGTCTAAAAAC
CCTGCACTTTTTGAAAAATCAGCAGATTCTGGGACTAAACAGAATGATGAGTGAAAAGAT
GTAGATAAATTTCCCTGATTCCTCTCCTCTTCTCTAGGACTGACAGGAACATAAATGATG
AGTCTGCATGTGGGTGTCCAAGGGGTAAAGGGAACCACCTGGGGGCCTGGATGCCACCCT
CATGGCCAGAGGTGGCTGCGACTTGGGCATCAGTCCGAGGCATACGACAGTAATGTCTGT
AACCTGCAGAAGCTGTTTTCTGACAATCACCAGATCGTCCCAACCTATAACAACAAATAT
TGCTATTACCTGACAAGACTGAGACTTCTGTGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTCCTCCCTCATTTCATAGAAAGAGGTTTGTTTGTTTGTTTTTAAAGCACTTAGTTAT
AATTTTATTTTTTTAATCCAGTTCTCTCTAACTCTGGCTTTTGCTATCAAACCATTCAAA
AGTTGGATCTGAGTTTGGAGAAACAGCTTCCCAACTGAAGAGGGTGTGATTTTGCAACAT
GTTTAATAGTTTCTATTTGTTGGCTAGACCTTTCCAGAGTGTGTCTTCTGAAGTGAGAAG
TCACTCTGCATTTCAAGTACTCCTTTCCTCCAACCCTGTGGTACTTGAATGTCTAAAAAC
CCTGCACTTTTTGAAAAATCAGCAGATTCTGGGACTAAACAGAATGATGAGTGAAAAGAT
GTAGATAAATTTCCCTGATTCCTCTCCTCTTCTCTAGGACTGACAGGAACATAAATGATG
AGTCTGCATGTGGGTGTCCAAGGGGTAAAGGGAACCACCTGGGGGCCTGGATGCCACCCT
CATGGCCAGAGGTGGCTGCGACTTGGGCATCAGTCCGAGGCATACGACAGTAATGTCTGT
AACCTGCAGAAGCTGTTTTCTGACAATCACCAGATCGTCCCAACCTATAACAACAAATAT
TGCTATTACCTGACAAGACTGAGACTTCTGTGGT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               208-326, + strand, RNAz p=0.884293

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               208-326, + strand, RNAz p=0.884293

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_007011, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_007011, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               68-634, gnl|bosTau2|chr21 (16071645-16071063)
               

               
               68-634, gnl|Hg17|chr15 (87540880-87541487)
               

               
               68-634, gnl|Mm7|chr7 (75229598-75230129)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               68-634, gnl|bosTau2|chr21 (16071645-16071063)
               

               
               68-634, gnl|Hg17|chr15 (87540880-87541487)
               

               
               68-634, gnl|Mm7|chr7 (75229598-75230129)

	68-634, gnl\|bosTau2\|chr21 (16071645-16071063)
	68-634, gnl\|Hg17\|chr15 (87540880-87541487)
	68-634, gnl\|Mm7\|chr7 (75229598-75230129)