Liv1-LVRM1D060197
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AATTTCAGGGTGGAGGAGAAGTAGAAGCCTGTGTTGATGCTTCTTCCAAACATCCCAGAA
TCTTCAACAAGGGTGAGAACAGTGGCAGGCCACCCCTGCTGATTCAGGAAGGAAGCTGAA
GGAAGAATCCAGATTGAGAAGCTGCAATCAAGGCTGGCATCAATCCCATTTTCTCCTTTG
AGATCCTGCAGAAGATCCTAATGGAGGAGGATAATGCCCAGAGAGAGGAGCCCAAGGAGG
ATGAAGTTGGTGATGGGCAACATGTCGATTCCAACAAAATTATGGCAGAGCAGAGCCACA
TGCAAAAGCAGCTGGATTTACAGAATGGTAGCTTAGAGGTGGGCTTAGTGGTGAATTCCC
TGGAGAACGATTCCAAAAACATGATGGAGAGCTTGAGCCCCAAGAAATATTCTTCCAGTC
TGAGATTTAAAGCCAATGGAAACTATTCAGGTTCCTATTTAACTCTTTCACAACCCGTGT
CTGCTAAAAGAAGCCCTTCTCCTTTGGGAACCAGTGTCAGAAGTAGCCCCTCTTTGGCCA
AAATCCAGGGAACCAAGCAGTTCTCTTGCGATGGAACTGACAAAAATATTTCCATGAAAC
CTCCCACTCCTTCACTCAGTGCTTCAGCCTCCCTTGG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AATTTCAGGGTGGAGGAGAAGTAGAAGCCTGTGTTGATGCTTCTTCCAAACATCCCAGAA
TCTTCAACAAGGGTGAGAACAGTGGCAGGCCACCCCTGCTGATTCAGGAAGGAAGCTGAA
GGAAGAATCCAGATTGAGAAGCTGCAATCAAGGCTGGCATCAATCCCATTTTCTCCTTTG
AGATCCTGCAGAAGATCCTAATGGAGGAGGATAATGCCCAGAGAGAGGAGCCCAAGGAGG
ATGAAGTTGGTGATGGGCAACATGTCGATTCCAACAAAATTATGGCAGAGCAGAGCCACA
TGCAAAAGCAGCTGGATTTACAGAATGGTAGCTTAGAGGTGGGCTTAGTGGTGAATTCCC
TGGAGAACGATTCCAAAAACATGATGGAGAGCTTGAGCCCCAAGAAATATTCTTCCAGTC
TGAGATTTAAAGCCAATGGAAACTATTCAGGTTCCTATTTAACTCTTTCACAACCCGTGT
CTGCTAAAAGAAGCCCTTCTCCTTTGGGAACCAGTGTCAGAAGTAGCCCCTCTTTGGCCA
AAATCCAGGGAACCAAGCAGTTCTCTTGCGATGGAACTGACAAAAATATTTCCATGAAAC
CTCCCACTCCTTCACTCAGTGCTTCAGCCTCCCTTGG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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32-118, - strand, RNAmicro p=0.971706 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
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32-118, - strand, RNAmicro p=0.971706 |
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11-153, gnl|bosTau2|chr1 (32186588-32186730) |
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11-153, gnl|Hg17|chr3 (112934100-112934241) |
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267-635, gnl|bosTau2|chr1 (32336012-32336380) |
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267-635, gnl|canFam2|chr33 (19570097-19570462) |
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267-635, gnl|danRer3|chr24 (23237871-23238170) |
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267-635, gnl|dasNov1|scaffold_48173 (34201-34550) |
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267-635, gnl|echTel1|scaffold_310984 (4889-4543) |
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267-635, gnl|galGal2|chr1 (82489059-82489388) |
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267-635, gnl|hg17|chr3 (113085567-113085914) |
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267-635, gnl|Hg17|chr3 (113085600-113085968) |
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267-635, gnl|loxAfr1|scaffold_7568 (60992-60645) |
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267-635, gnl|mm7|chr16 (45603659-45603315) |
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267-635, gnl|Mm7|chr16 (45603624-45603259) |
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267-635, gnl|monDom2|scaffold_24 (5870383-5870754) |
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267-635, gnl|oryCun1|scaffold_213529 (222997-223353) |
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267-635, gnl|panTro1|chr2 (114673518-114673865) |
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267-635, gnl|rheMac2|chr2 (31979751-31980097) |
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267-635, gnl|rn3|chr11 (56541775-56542108) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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11-153, gnl|bosTau2|chr1 (32186588-32186730) |
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11-153, gnl|Hg17|chr3 (112934100-112934241) |
| |
|
267-635, gnl|bosTau2|chr1 (32336012-32336380) |
|
267-635, gnl|canFam2|chr33 (19570097-19570462) |
|
267-635, gnl|danRer3|chr24 (23237871-23238170) |
|
267-635, gnl|dasNov1|scaffold_48173 (34201-34550) |
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267-635, gnl|echTel1|scaffold_310984 (4889-4543) |
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267-635, gnl|galGal2|chr1 (82489059-82489388) |
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267-635, gnl|hg17|chr3 (113085567-113085914) |
|
267-635, gnl|Hg17|chr3 (113085600-113085968) |
|
267-635, gnl|loxAfr1|scaffold_7568 (60992-60645) |
|
267-635, gnl|mm7|chr16 (45603659-45603315) |
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267-635, gnl|Mm7|chr16 (45603624-45603259) |
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267-635, gnl|monDom2|scaffold_24 (5870383-5870754) |
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267-635, gnl|oryCun1|scaffold_213529 (222997-223353) |
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267-635, gnl|panTro1|chr2 (114673518-114673865) |
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267-635, gnl|rheMac2|chr2 (31979751-31980097) |
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267-635, gnl|rn3|chr11 (56541775-56542108) |
