Non-Coding RNA Search

Liv1-LVRM1E020166

Sequence:


               
               TATATGACGGATTTCTTTTTCTTTTTTTTTTTTTTTTTTAAACCTGTTTAGGAATGTTAA
ATGCTACAAAGGGGATTTGGGGGGAGAGTGTGTTTTTAAAGCACAATATAAACTTGGTTT
TGTTTGGTTTTCAACATTACCTGGAATGTTTGCTACTGAGATTGTGTTGGAGGCACACAG
AGTATTCTGAGAACCTGAAAACCACAAGTCGCAACTTGAAAATGTGTTCTGTGACCCCAG
AGACTGTGGGAAGTCACTGAGCCCTCATTCTGCACACTGGGGCACCTGGCCTACCTGTTT
GCAGGATCCCTGCAAAGTAGCACACGTTGCTGCTTGCTCTCTGGGGCACGTGCTCCCAAG
CAGCTCAGTATCCAGAGCCGAAACTTTGGCATTTCCATTCCTGTAAGTGAGAGAAACTCT
ACCATAGAAGGTGGTATTTATTTTCTGCTTAAAATGGGGTAAAAAAAAAGGCAGGCATAC
TCCAGACACCTGTGTGCATGCTCGAGGAACCGTCTGTCACCTGTGACAAGTAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATATGACGGATTTCTTTTTCTTTTTTTTTTTTTTTTTTAAACCTGTTTAGGAATGTTAA
ATGCTACAAAGGGGATTTGGGGGGAGAGTGTGTTTTTAAAGCACAATATAAACTTGGTTT
TGTTTGGTTTTCAACATTACCTGGAATGTTTGCTACTGAGATTGTGTTGGAGGCACACAG
AGTATTCTGAGAACCTGAAAACCACAAGTCGCAACTTGAAAATGTGTTCTGTGACCCCAG
AGACTGTGGGAAGTCACTGAGCCCTCATTCTGCACACTGGGGCACCTGGCCTACCTGTTT
GCAGGATCCCTGCAAAGTAGCACACGTTGCTGCTTGCTCTCTGGGGCACGTGCTCCCAAG
CAGCTCAGTATCCAGAGCCGAAACTTTGGCATTTCCATTCCTGTAAGTGAGAGAAACTCT
ACCATAGAAGGTGGTATTTATTTTCTGCTTAAAATGGGGTAAAAAAAAAGGCAGGCATAC
TCCAGACACCTGTGTGCATGCTCGAGGAACCGTCTGTCACCTGTGACAAGTAAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               246-399, + strand, RNAz p=0.906725

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               246-399, + strand, RNAz p=0.906725

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               47-532, gnl|bosTau2|chr4 (66553296-66553782)
               

               
               47-532, gnl|Hg17|chr13 (32684924-32684446)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               47-532, gnl|bosTau2|chr4 (66553296-66553782)
               

               
               47-532, gnl|Hg17|chr13 (32684924-32684446)

	47-532, gnl\|bosTau2\|chr4 (66553296-66553782)
	47-532, gnl\|Hg17\|chr13 (32684924-32684446)