Liv1-LVRM1G030035
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCCGCCCTCCGCTCTCCTCCCGCTCGCCGTTAGGGAGGCTCTGCGCCTCAGCCGCTGCC TCCGTCGCCGCTCACATCCCCTCTTCCGCGTCTCTGCCGCCGCCACCGCCGGGGGCATCC AGGGGTCGCTTACCGGGCTGGCCCCGCGCCACAACAGTCGCTTCAGCCTCTCGCCAGTGG CCGCCACAGGAAGAGGCTCGCCGGCTGCGGAACCACTTGGGGCCTCAGTTCTTGCCCTCT TGCGGTTGCCGCGGGTCCTGGAGAAGCGGCAGCGGCCGGGGAACGGGGCGTCGCGGTTCC AACGATTAACTGCTGAAGTACTGATCGAGTTCTGCGTTTCTTCAATGAGGAACTACAGGC TGATCTTCTGCCATAATCTCAAACAGCCATAAATGACAAAAGAATGCTTGCTCAGTGAGG GTAGCTGGTGCAGAAGCCATTTTTTAAACTTAGGTGTTTAAGTACTCGAAGAAAAGACAG CTTTGATTTCTGGCTGCAAAAAAGATATGAGGAAGAGCTCCTCCCCTTCCTTGAGTAACT GCAACTCCGTTCTTGCTAACAAAATATTTGGAATTCCACTTGATGAGCTGCAGCAGGGAG GACATCCAGACAATGAGGTTCCGTTCATAGTCCGCCACGTAGTGGACTATATTGAGGAAC ATGGAGGTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCCGCCCTCCGCTCTCCTCCCGCTCGCCGTTAGGGAGGCTCTGCGCCTCAGCCGCTGCC TCCGTCGCCGCTCACATCCCCTCTTCCGCGTCTCTGCCGCCGCCACCGCCGGGGGCATCC AGGGGTCGCTTACCGGGCTGGCCCCGCGCCACAACAGTCGCTTCAGCCTCTCGCCAGTGG CCGCCACAGGAAGAGGCTCGCCGGCTGCGGAACCACTTGGGGCCTCAGTTCTTGCCCTCT TGCGGTTGCCGCGGGTCCTGGAGAAGCGGCAGCGGCCGGGGAACGGGGCGTCGCGGTTCC AACGATTAACTGCTGAAGTACTGATCGAGTTCTGCGTTTCTTCAATGAGGAACTACAGGC TGATCTTCTGCCATAATCTCAAACAGCCATAAATGACAAAAGAATGCTTGCTCAGTGAGG GTAGCTGGTGCAGAAGCCATTTTTTAAACTTAGGTGTTTAAGTACTCGAAGAAAAGACAG CTTTGATTTCTGGCTGCAAAAAAGATATGAGGAAGAGCTCCTCCCCTTCCTTGAGTAACT GCAACTCCGTTCTTGCTAACAAAATATTTGGAATTCCACTTGATGAGCTGCAGCAGGGAG GACATCCAGACAATGAGGTTCCGTTCATAGTCCGCCACGTAGTGGACTATATTGAGGAAC ATGGAGGTCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 510-629, - strand, RNAz p=0.858122 | |
| 534-664, + strand, RNAz p=0.945396 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 510-629, - strand, RNAz p=0.858122 | |
| 534-664, + strand, RNAz p=0.945396 |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 1-302, gnl|bosTau2|chr7 (34589742-34589442) | |
| 1-302, gnl|canFam2|chr11 (28720845-28721228) | |
| 1-302, gnl|echTel1|scaffold_308648 (39618-40026) | |
| 1-302, gnl|hg17|chr5 (137396274-137396653) | |
| 1-302, gnl|Hg17|chr5 (137396665-137396372) | |
| 1-302, gnl|mm7|chr18 (34881886-34882286) | |
| 1-302, gnl|Mm7|chr18 (34882291-34881996) | |
| 1-302, gnl|monDom2|scaffold_6 (71533087-71532617) | |
| 1-302, gnl|panTro1|chr4 (144000705-144001084) | |
| 1-302, gnl|rheMac2|chr6 (134433290-134433668) | |
| 1-302, gnl|rn3|chr18 (27002378-27002768) | |
| 470-664, gnl|bosTau2|chr7 (34577386-34577192) | |
| 470-664, gnl|canFam2|chr11 (28700512-28700693) | |
| 470-664, gnl|danRer3|chr14 (23956737-23956895) | |
| 470-664, gnl|dasNov1|scaffold_35298 (3582-3763) | |
| 470-664, gnl|echTel1|scaffold_254609 (69-250) | |
| 470-664, gnl|galGal2|chr13 (13142097-13141917) | |
| 470-664, gnl|hg17|chr5 (137382527-137382708) | |
| 470-664, gnl|Hg17|chr5 (137382736-137382542) | |
| 470-664, gnl|loxAfr1|scaffold_28452 (14251-14070) | |
| 470-664, gnl|mm7|chr18 (34873417-34873598) | |
| 470-664, gnl|Mm7|chr18 (34873626-34873432) | |
| 470-664, gnl|monDom2|scaffold_6 (71578125-71577942) | |
| 470-664, gnl|oryCun1|scaffold_181681 (3997-3816) | |
| 470-664, gnl|panTro1|chr4 (143986828-143987009) | |
| 470-664, gnl|rheMac2|chr6 (134417478-134417659) | |
| 470-664, gnl|rn3|chr18 (26994222-26994403) | |
| 470-664, gnl|tetNig1|chrUn_random (102365700-102365510) | |
| 470-664, gnl|xenTro1|scaffold_15 (70495-70678) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-302, gnl|bosTau2|chr7 (34589742-34589442) | |
| 1-302, gnl|canFam2|chr11 (28720845-28721228) | |
| 1-302, gnl|echTel1|scaffold_308648 (39618-40026) | |
| 1-302, gnl|hg17|chr5 (137396274-137396653) | |
| 1-302, gnl|Hg17|chr5 (137396665-137396372) | |
| 1-302, gnl|mm7|chr18 (34881886-34882286) | |
| 1-302, gnl|Mm7|chr18 (34882291-34881996) | |
| 1-302, gnl|monDom2|scaffold_6 (71533087-71532617) | |
| 1-302, gnl|panTro1|chr4 (144000705-144001084) | |
| 1-302, gnl|rheMac2|chr6 (134433290-134433668) | |
| 1-302, gnl|rn3|chr18 (27002378-27002768) | |
| 470-664, gnl|bosTau2|chr7 (34577386-34577192) | |
| 470-664, gnl|canFam2|chr11 (28700512-28700693) | |
| 470-664, gnl|danRer3|chr14 (23956737-23956895) | |
| 470-664, gnl|dasNov1|scaffold_35298 (3582-3763) | |
| 470-664, gnl|echTel1|scaffold_254609 (69-250) | |
| 470-664, gnl|galGal2|chr13 (13142097-13141917) | |
| 470-664, gnl|hg17|chr5 (137382527-137382708) | |
| 470-664, gnl|Hg17|chr5 (137382736-137382542) | |
| 470-664, gnl|loxAfr1|scaffold_28452 (14251-14070) | |
| 470-664, gnl|mm7|chr18 (34873417-34873598) | |
| 470-664, gnl|Mm7|chr18 (34873626-34873432) | |
| 470-664, gnl|monDom2|scaffold_6 (71578125-71577942) | |
| 470-664, gnl|oryCun1|scaffold_181681 (3997-3816) | |
| 470-664, gnl|panTro1|chr4 (143986828-143987009) | |
| 470-664, gnl|rheMac2|chr6 (134417478-134417659) | |
| 470-664, gnl|rn3|chr18 (26994222-26994403) | |
| 470-664, gnl|tetNig1|chrUn_random (102365700-102365510) | |
| 470-664, gnl|xenTro1|scaffold_15 (70495-70678) |