Non-Coding RNA Search

Liv1-LVRM1H030182

Sequence:


               
               CTTCTGCTGTAACTTTCATGCTCGTGGAAGGCGTCTGAGGACAGTGTTTCCAGAGTGCTT
GCTGTTTAATCAAAGCTGTAGATTCACTATGACTAATATCACAAGGGGAAGACCATTACC
TGTCTTGAAGTGTAATGCCACTGCATTCCATAAATGAGTACATAAATGATCCTGGTAATA
GGTGGCCTGTGGCTGGGCCACCTCACCATCGCTTGTTAACGAGCTATTCAGATGGGTATC
TGCCTGACTCAGGATGTGCAGGCCAACGCTGAGAGAGCTGTTACTTAGGAAACACTGTAC
TCAGTTGCCTTAAAAGGTTATTCATCTTGCTACTCTGGGGTGATGGCTCTAAGAGCAGCC
AGTCCCATGTTTGTGTTTAGGTAAATATCTTAGAGTTTTGTTCATTTCTTTCTTTCCTTA
TTGACCATATAAGCTAATGAGCTCTTGATCATGGAATAGTTGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCTGCTGTAACTTTCATGCTCGTGGAAGGCGTCTGAGGACAGTGTTTCCAGAGTGCTT
GCTGTTTAATCAAAGCTGTAGATTCACTATGACTAATATCACAAGGGGAAGACCATTACC
TGTCTTGAAGTGTAATGCCACTGCATTCCATAAATGAGTACATAAATGATCCTGGTAATA
GGTGGCCTGTGGCTGGGCCACCTCACCATCGCTTGTTAACGAGCTATTCAGATGGGTATC
TGCCTGACTCAGGATGTGCAGGCCAACGCTGAGAGAGCTGTTACTTAGGAAACACTGTAC
TCAGTTGCCTTAAAAGGTTATTCATCTTGCTACTCTGGGGTGATGGCTCTAAGAGCAGCC
AGTCCCATGTTTGTGTTTAGGTAAATATCTTAGAGTTTTGTTCATTTCTTTCTTTCCTTA
TTGACCATATAAGCTAATGAGCTCTTGATCATGGAATAGTTGAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               154-272, + strand, RNAz p=0.611152

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               154-272, + strand, RNAz p=0.611152

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               41-464, gnl|bosTau2|chr25 (5350670-5350252)
               

               
               41-464, gnl|Hg17|chr11 (111076081-111076491)
               

               
               41-464, gnl|Mm7|chr9 (50896771-50896417)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               41-464, gnl|bosTau2|chr25 (5350670-5350252)
               

               
               41-464, gnl|Hg17|chr11 (111076081-111076491)
               

               
               41-464, gnl|Mm7|chr9 (50896771-50896417)

	41-464, gnl\|bosTau2\|chr25 (5350670-5350252)
	41-464, gnl\|Hg17\|chr11 (111076081-111076491)
	41-464, gnl\|Mm7\|chr9 (50896771-50896417)