Non-Coding RNA Search

Lng1-LNG010002H10

Sequence:


               
               TTTCATTATAGATGCCACTGAGTCAGATGATTTGGGGTATAGGCTAGCTTGGAGTTAGCT
TTGTTAACTGGCTCCTCTAACTCTTCCCCATTTAGGACCTTCCTTTCCATCCCGAGGCTT
TCTGGTGGCTGACCTTGCTGCAGGCAGCTACCTGTCCTCCCCCAGCCCCTGGATGAGGGT
CTACTGAACCTGCAGAGCTGCTCCCACCCTCTGAAGGAGCCTGGGTGGGACAAGTTGGTT
GTTTTGGGTTTGTATGTTTTTTGCTTTTTagggctgcaccctcggaatatggaggtttcc
aggctaggagtcgaatcggagctacagctgccggcctgcaccacagccacagcaatgcag
gatctgagcctcgtctgcgacctgcaccacagctcacagcaacgccaggtccttgaccca
ctgagcgaggccagggatccaacccatgtcctcatggatcctggttggatttgtttccAT
TACCCTGAAATCGGAACTCTGAGTTGGTTGTTTTTAGGCATTAGAGAAGAGTCTTCACTG
GCAATCAGAGAAATCCACTCATCTTGGGTTTTCACCCTAGAAGTGGGTGGAAAGGGAATT
TGCTGTTCATTCCTTTCCTCTTGATGGAGGTTGCTTGTTTTGGATAAAGTAGCAATATTC
CTTTAAAACTAGAAATTGTGATCCTTGAGATTGAATGTGTCCACAGCAGTTCTAATTTTT
TCACACCCAGAATGGGCTGACAGAATCAATTTCCTTGGAGGTGTTAAGGCTGTAGGTATT
ACTGTTGCTGGATGAAAGTTAGTGTGGGCCAGTGGGAGGAGGAACAGCGTGGCCCTCTCC
ACTATCGTTTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCATTATAGATGCCACTGAGTCAGATGATTTGGGGTATAGGCTAGCTTGGAGTTAGCT
TTGTTAACTGGCTCCTCTAACTCTTCCCCATTTAGGACCTTCCTTTCCATCCCGAGGCTT
TCTGGTGGCTGACCTTGCTGCAGGCAGCTACCTGTCCTCCCCCAGCCCCTGGATGAGGGT
CTACTGAACCTGCAGAGCTGCTCCCACCCTCTGAAGGAGCCTGGGTGGGACAAGTTGGTT
GTTTTGGGTTTGTATGTTTTTTGCTTTTTagggctgcaccctcggaatatggaggtttcc
aggctaggagtcgaatcggagctacagctgccggcctgcaccacagccacagcaatgcag
gatctgagcctcgtctgcgacctgcaccacagctcacagcaacgccaggtccttgaccca
ctgagcgaggccagggatccaacccatgtcctcatggatcctggttggatttgtttccAT
TACCCTGAAATCGGAACTCTGAGTTGGTTGTTTTTAGGCATTAGAGAAGAGTCTTCACTG
GCAATCAGAGAAATCCACTCATCTTGGGTTTTCACCCTAGAAGTGGGTGGAAAGGGAATT
TGCTGTTCATTCCTTTCCTCTTGATGGAGGTTGCTTGTTTTGGATAAAGTAGCAATATTC
CTTTAAAACTAGAAATTGTGATCCTTGAGATTGAATGTGTCCACAGCAGTTCTAATTTTT
TCACACCCAGAATGGGCTGACAGAATCAATTTCCTTGGAGGTGTTAAGGCTGTAGGTATT
ACTGTTGCTGGATGAAAGTTAGTGTGGGCCAGTGGGAGGAGGAACAGCGTGGCCCTCTCC
ACTATCGTTTTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               135-245, - strand, RNAz p=0.83183

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               135-245, - strand, RNAz p=0.83183

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               66-245, gnl|bosTau2|chr24 (25736526-25736338)
               

               
               66-245, gnl|Hg17|chr18 (388675-388496)
               


               
               505-841, gnl|bosTau2|chr24 (25736347-25736023)
               

               
               505-841, gnl|Hg17|chr18 (388505-388155)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               66-245, gnl|bosTau2|chr24 (25736526-25736338)
               

               
               66-245, gnl|Hg17|chr18 (388675-388496)
               


               
               505-841, gnl|bosTau2|chr24 (25736347-25736023)
               

               
               505-841, gnl|Hg17|chr18 (388505-388155)

	66-245, gnl\|bosTau2\|chr24 (25736526-25736338)
	66-245, gnl\|Hg17\|chr18 (388675-388496)

	505-841, gnl\|bosTau2\|chr24 (25736347-25736023)
	505-841, gnl\|Hg17\|chr18 (388505-388155)